RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MT-CO3P00414 261 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 RPL19P84098 196 aaKnown RBP11.2□□□□□ -0.62
NFKB1-202ENST00000394820 HERPUD1Q15011 391 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 MANBALQ9NQG1 85 aa11.2□□□□□ -0.62
NFKB1-202ENST00000394820 HRASP01112 189 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 CCL11P51671 97 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 TBC1D28Q2M2D7 210 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 YLPM1P49750 1951 aaKnown RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 H0Y980 276 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 GATA2P23769 480 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 ID3Q02535 119 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 Q6ZN92 141 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 GGNQ86UU5 652 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 FAM19A2Q8N3H0 131 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF525Q8N782 197 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 OR10G8Q8NGN5 311 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 KCNE4Q8WWG9 221 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 NANOS1Q8WY41 292 aaKnown RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 HSD17B10Q99714 261 aaKnown RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 SRD5A3Q9H8P0 318 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 NAGKQ9UJ70 344 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF391Q9UJN7 358 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 IGHV3-21A0A0B4J1V1 117 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 B4DEV8 164 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 OR5G3P0C626 314 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 UCP1P25874 307 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 TAS2R60P59551 318 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 SUMO1P63165 101 aaKnown RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 MDP1Q86V88 176 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 FAM122AQ96E09 287 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 NUDT16L1Q9BRJ7 211 aaKnown RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 TMEM147Q9BVK8 224 aa11.19□□□□□ -0.62
NFKB1-202ENST00000394820 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 WDR61Q9GZS3 305 aaKnown RBP11.19□□□□□ -0.62
NFKB1-202ENST00000394820 A0A1W2PRD5 423 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 A0A1W2PRF3 423 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 A0A1W2PRM7 423 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 C17orf98A8MV24 154 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-202ENST00000394820 GZMBP10144 247 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 LYL1P12980 280 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 RAB4AP20338 218 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 HINT1P49773 126 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-202ENST00000394820 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 OR2Z1Q8NG97 314 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 TRIB1Q96RU8 372 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 PRDM13Q9H4Q3 707 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 CTXND1A0A1B0GTU2 59 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 C9orf172C9J069 976 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 H3BTX0 84 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 CELA3BP08861 270 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 NUBP1P53384 320 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 VAMP3Q15836 100 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 KCNMB1Q16558 191 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 CEACAM21Q3KPI0 293 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 FAM90A2PQ658T7 463 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 OR5A2Q8NGI9 324 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 ARL2-SNX15V9GYD0 113 aa11.18□□□□□ -0.62
NFKB1-202ENST00000394820 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF716A6NP11 495 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
NFKB1-202ENST00000394820 ENSAO43768 121 aaKnown RBP11.17□□□□□ -0.62
NFKB1-202ENST00000394820 CCL1P22362 96 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 S100A7P31151 101 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 FOXO1Q12778 655 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 PSG5Q15238 335 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 DOLPP1Q86YN1 238 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 ZNF586Q9NXT0 402 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 SPRY3O43610 288 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 IGHEP01854 428 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 CSN3P07498 182 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 B3GALT5-AS1P59052 145 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 TPPP2P59282 170 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 PLPPR1Q8TBJ4 325 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
NFKB1-202ENST00000394820 TMEM265A0A087WTH1 108 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 KBTBD11O94819 623 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 ARL14EPLP0DKL9 152 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 CFPP27918 469 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 RNASEKQ6P5S7 137 aaKnown RBP11.17□□□□□ -0.62
NFKB1-202ENST00000394820 RND1Q92730 232 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 ST6GALNAC6Q969X2 333 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 POLDIP2Q9Y2S7 368 aa11.17□□□□□ -0.62
NFKB1-202ENST00000394820 ODAMA1E959 279 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 HSBP1O75506 76 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 GZMHP20718 246 aa11.16□□□□□ -0.62
NFKB1-202ENST00000394820 HNRNPA3P51991 378 aaKnown RBP11.16□□□□□ -0.62
NFKB1-202ENST00000394820 TIGITQ495A1 244 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms