RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CCL26Q9Y258 94 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 MED12Q93074 2177 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 LOC102723996A0A087X1L8 192 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 SAA2-SAA4A0A096LPE2 208 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 A0A1B0GW15 77 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 TMPRSS2O15393 492 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 TFF3Q07654 80 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 RPEL1Q2QD12 228 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 OR8B3Q8NGG8 313 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 VSTM2LQ96N03 204 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 ULBP2Q9BZM5 246 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 COMMD5Q9GZQ3 224 aa10.59□□□□□ -0.71
SLC28A1-203ENST00000394573 IGKV1D-13A0A0B4J2D9 117 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 A0A0G2JLM5 398 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 C2orf70A6NJV1 201 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 PDE6DO43924 150 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 LINC00869P0C866 280 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 IGKV1-13P0DP09 117 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 CEBPDP49716 269 aaPredicted RBP10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 SLC38A11Q08AI6 406 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM136Q6ZRR5 245 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 CLDN23Q96B33 292 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 CCL28Q9NRJ3 127 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 CACNG5Q9UF02 275 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 ZNF835Q9Y2P0 537 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 SRFP11831 508 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 TBR1Q16650 682 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 BOD1L2Q8IYS8 172 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 SCCPDHQ8NBX0 429 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 TECRQ9NZ01 308 aaKnown RBP10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
SLC28A1-203ENST00000394573 ZNF407Q9C0G0 2248 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 WDFY3Q8IZQ1 3526 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 ISLRO14498 428 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 RER1O15258 196 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 CLEC3BP05452 202 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 HBG1P69891 147 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 HBG2P69892 147 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 C18orf32Q8TCD1 76 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 RNF183Q96D59 192 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 VN1R3Q9BXE9 311 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 B4GALT7Q9UBV7 327 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 CXCL11O14625 94 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 Q96M66 194 aa10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 NXF5Q9H1B4 397 aaKnown RBP10.57□□□□□ -0.72
SLC28A1-203ENST00000394573 UNC13CQ8NB66 2214 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 SYNGR2O43760 224 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 PVRP15151 417 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 OR1D4P47884 311 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 OR1D5P58170 312 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 SGCBQ16585 318 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 C16orf52Q8NHV5 167 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 RDH5Q92781 318 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 RNASE7Q9H1E1 156 aaKnown RBP10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 SIVA1O15304 175 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 PTGDSP41222 190 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 RPL8P62917 257 aaKnown RBP10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 MTURNQ8N3F0 131 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 OR10G3Q8NGC4 313 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 OR1L1Q8NH94 360 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 PILRAQ9UKJ1 303 aa10.56□□□□□ -0.72
SLC28A1-203ENST00000394573 TRAV36DV7A0A075B6V5 113 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 TGFBR3LH3BV60 316 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 DEGS1O15121 323 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM52BQ4KMG9 183 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 RNFT1Q5M7Z0 435 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 RAB40CQ96S21 281 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 CHRNA10Q9GZZ6 450 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 NCOA6Q14686 2063 aaPredicted RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 ZNF16P17020 682 aaPredicted RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 DPTQ07507 201 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM97Q5BJF2 176 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 ADAMTSL5Q6ZMM2 481 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 SSX8Q7RTT4 187 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 OR10G6Q8NH81 332 aa10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 NANOS1Q8WY41 292 aaKnown RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
SLC28A1-203ENST00000394573 KLRC4-KLRK1H3BQV0 150 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 TSPAN13O95857 204 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 MT-CO3P00414 261 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 APCSP02743 223 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 REG1AP05451 166 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 FTH1P19P0C7X4 201 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 PSG2P11465 335 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 HTTP42858 3142 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 AESQ08117 197 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 KIR3DS1Q14943 382 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms