RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ARL14EPLP0DKL9 152 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CCL4P13236 92 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 COX5AP20674 150 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 GDF1P27539 372 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CEACAM8P31997 349 aaPredicted RBP12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CCKARP32238 428 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 MRPS11P82912 194 aaKnown RBP12.24□□□□□ -0.45
SFXN3-202ENST00000393459 MSMO1Q15800 293 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 SPATA45Q537H7 98 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
SFXN3-202ENST00000393459 ZNF826PQ6ZT77 177 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 DLL3Q9NYJ7 618 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 NAT8BQ9UHF3 227 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 FBXL7Q9UJT9 491 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 MED13Q9UHV7 2174 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CTXND1A0A1B0GTU2 59 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 ODAMA1E959 279 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 TMEM210A6NLX4 147 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 DIRC3C9JPN6 131 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 PAX1P15863 534 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 SPATA31B1PQ5VZV4 182 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 ZNF324BQ6AW86 544 aaPredicted RBP12.24□□□□□ -0.45
SFXN3-202ENST00000393459 SAXO1Q8IYX7 474 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CARFQ8N187 725 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 WDYHV1Q96HA8 205 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 RCHY1Q96PM5 261 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 P2RX4Q99571 388 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 NPCDR1Q9BY65 106 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CELA3AP09093 270 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 EDDM3AQ14507 147 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 ZNF573Q86YE8 665 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 CISD2Q8N5K1 135 aaKnown RBP12.24□□□□□ -0.45
SFXN3-202ENST00000393459 SIGLECL1Q8N7X8 197 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 SFRP2Q96HF1 295 aa12.24□□□□□ -0.45
SFXN3-202ENST00000393459 A0A1W2PQM1 296 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 MRPL33O75394 65 aaKnown RBP12.23□□□□□ -0.45
SFXN3-202ENST00000393459 MGST1P10620 155 aaKnown RBP12.23□□□□□ -0.45
SFXN3-202ENST00000393459 LIFP15018 202 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 GLB1P16278 677 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 CXCL12P48061 93 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 FGF12P61328 243 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 SERF2P84101 59 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 AESQ08117 197 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 TMEM183BQ1AE95 376 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 STARD4Q96DR4 205 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 RNASE7Q9H1E1 156 aaKnown RBP12.23□□□□□ -0.45
SFXN3-202ENST00000393459 TRAV1-1A0A0B4J248 108 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 WNT9BO14905 357 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 OR5G3P0C626 314 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 HTD2P86397 168 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 LHFPL4Q7Z7J7 247 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 SSBP3Q9BWW4 388 aaPredicted RBP12.23□□□□□ -0.45
SFXN3-202ENST00000393459 HES7Q9BYE0 225 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 GPR35Q9HC97 309 aa12.23□□□□□ -0.45
SFXN3-202ENST00000393459 M0QZ24 198 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 FOXH1O75593 365 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 CD24P25063 80 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 TPPP2P59282 170 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 ALKBH6Q3KRA9 238 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 TPTE2P1Q5T6R2 138 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 SPINK14Q6IE38 97 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 RPS19BP1Q86WX3 136 aaKnown RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 TUSC5Q8IXB3 177 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 FAM58AQ8N1B3 248 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 APOBEC3DQ96AK3 386 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 TBL2Q9Y4P3 447 aaKnown RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 C20orf202A1L168 122 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 OR6C6A6NF89 314 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 IGLV2-14P01704 120 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 LINC00310P59036 64 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 RELQ04864 619 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 ABHD12Q8N2K0 398 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 MIEN1Q9BRT3 115 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 CBR3O75828 277 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 WNT2P09544 360 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 GABRA2P47869 451 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 ELOVL5Q9NYP7 299 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-202ENST00000393459 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
SFXN3-202ENST00000393459 NBASA2RRP1 2371 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 RRHO14718 337 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 GGCTO75223 188 aaKnown RBP12.21□□□□□ -0.45
SFXN3-202ENST00000393459 NXPH2O95156 264 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 OR10J4P0C629 311 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 HNRNPA3P51991 378 aaKnown RBP12.21□□□□□ -0.45
SFXN3-202ENST00000393459 SOX8P57073 446 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 RPL15P61313 204 aaKnown RBP12.21□□□□□ -0.45
SFXN3-202ENST00000393459 RELBQ01201 579 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 PDLIM3Q53GG5 364 aaPredicted RBP12.21□□□□□ -0.45
SFXN3-202ENST00000393459 APH1AQ96BI3 265 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 PYGO2Q9BRQ0 406 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 MRPS18CQ9Y3D5 142 aaKnown RBP12.21□□□□□ -0.45
SFXN3-202ENST00000393459 MED13LQ71F56 2210 aa12.21□□□□□ -0.45
SFXN3-202ENST00000393459 COL5A1P20908 1838 aaPredicted RBP12.21□□□□□ -0.45
SFXN3-202ENST00000393459 INTS1Q8N201 2190 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms