RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RBFOX2O43251 390 aaKnown RBP eCLIP21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 RAB7AP51149 207 aa21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 OR2B8PP59922 312 aa21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 ADAM5Q6NVV9 412 aa21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 CLDND2Q8NHS1 167 aa21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 DIRC2Q96SL1 478 aa21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 SMCO4Q9NRQ5 59 aa21.14■□□□□ 0.97
SMARCD3-203ENST00000392811 M0R036 132 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 SNRNP70P08621 437 aaKnown RBP21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 TNFRSF1AP19438 455 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 ICAM4Q14773 271 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF726P1Q15940 193 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 SOHLH1Q5JUK2 328 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF506Q5JVG8 444 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 SSX9Q7RTT3 188 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 S1PR3Q99500 378 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 C20orf24Q9BUV8 137 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 GAB2Q9UQC2 676 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 PRELID3BQ9Y3B1 194 aa21.13■□□□□ 0.97
SMARCD3-203ENST00000392811 C7orf77A4D0Y5 90 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 ATXN7O15265 892 aaPredicted RBP21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 SCAF4O95104 1147 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 RPS16P62249 146 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 SRP19P09132 144 aaKnown RBP21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 ATP6V1FQ16864 119 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 AARDQ4LEZ3 155 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 PRAMEF5Q5TYX0 476 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 SSX8Q7RTT4 187 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 VKORC1L1Q8N0U8 176 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 DDB2Q92466 427 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 WFIKKN1Q96NZ8 548 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 TMEM147Q9BVK8 224 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 MSRB2Q9Y3D2 182 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 DOCK11Q5JSL3 2073 aa21.12■□□□□ 0.97
SMARCD3-203ENST00000392811 FAM90A9PA6NNJ1 464 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 RBPJQ06330 500 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 TMEM41BQ5BJD5 291 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 SSX7Q7RTT5 188 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 OR10P1Q8NGE3 313 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 RND1Q92730 232 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 SAA2-SAA4A0A096LPE2 208 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 SAA2P0DJI9 122 aaPredicted RBP21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 ELLP55199 621 aaPredicted RBP21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 FAM122CQ6P4D5 195 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 RXFP4Q8TDU9 374 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 MBD3L1Q8WWY6 194 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 PINX1Q96BK5 328 aaKnown RBP21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 RCC1LQ96I51 464 aaKnown RBP21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 CLCC1Q96S66 551 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 IDI2-AS1Q9NZ38 188 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 TIMM9Q9Y5J7 89 aa21.11■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF729A6NN14 1252 aaPredicted RBP21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 IFNA17P01571 189 aa21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 KIR2DS2P43631 304 aa21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 LCN15Q6UWW0 184 aa21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF439Q8NDP4 499 aa21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 HCFC1P51610 2035 aa21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 PCNX1Q96RV3 2341 aa21.1■□□□□ 0.97
SMARCD3-203ENST00000392811 COLCA2A8K830 154 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 FBP1P09467 338 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 ERVK-16P61578 105 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 HNF4GQ14541 408 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF787Q6DD87 383 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 CENPVQ7Z7K6 275 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 OR4A16Q8NH70 328 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 CORO2AQ92828 525 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 ZNF251Q9BRH9 671 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 LINC00574Q9H8X3 128 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 TMPRSS2O15393 492 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 MMP23AO75900 390 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 HSPB1P04792 205 aaKnown RBP21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 NQO2P16083 231 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 TLE1Q04724 770 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 GNG13Q9P2W3 67 aa21.09■□□□□ 0.97
SMARCD3-203ENST00000392811 NKX6-3A6NJ46 265 aa21.08■□□□□ 0.97
SMARCD3-203ENST00000392811 PUS1Q9Y606 427 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMARCD3-203ENST00000392811 LOC102723971A0A1B0GUV8 181 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 C15orf62A8K5M9 175 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 GNG10P50151 68 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 FGF8P55075 233 aaPredicted RBP21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 GNB2P62879 340 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 FLI1Q01543 452 aaPredicted RBP21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 KHDC3LQ587J8 217 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 LYG1Q8N1E2 194 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 OR4S2Q8NH73 311 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 UNKLQ9H9P5 680 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 SAP30LQ9HAJ7 183 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 TMEM140Q9NV12 185 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 PTPRQQ9UMZ3 2332 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 TRAV3A0A0B4J244 114 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 DAOP14920 347 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 NDUFB7P17568 137 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 FGF7P21781 194 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 CEBPGP53567 150 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 TMPRSS3P57727 454 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 SPCS3P61009 180 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 MRPS11P82912 194 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 RELBQ01201 579 aa21.07■□□□□ 0.96
SMARCD3-203ENST00000392811 VWC2Q2TAL6 325 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms