RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 MBD3L1Q8WWY6 194 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 AMELYQ99218 206 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DECR2Q9NUI1 292 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LRP12Q9Y561 859 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MED12Q93074 2177 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CORTO00230 105 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TNFSF11O14788 317 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 XRCC2O43543 280 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 VAMP5O95183 116 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CDS2O95674 445 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 GNRHRP30968 328 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RPL23P62829 140 aaKnown RBP9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 GNMTQ14749 295 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 VAMP3Q15836 100 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PSG3Q16557 428 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MEP1BQ16820 701 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 C1orf140Q5VVS0 124 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLC22A24Q8N4F4 322 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR2C3Q8N628 320 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DYRK2Q92630 601 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PERPQ96FX8 193 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 REEP6Q96HR9 211 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SRA1Q9HD15 236 aaKnown RBP9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TUBG2Q9NRH3 451 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RFNGQ9Y644 331 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ZFHX3Q15911 3703 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NPIPA7E9PJI5 369 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 KBTBD11O94819 623 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NPIPA8P0DM63 369 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MSR1P21757 451 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 GCH1P30793 250 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CDKN1AP38936 164 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RAC3P60763 192 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 Q8N976 141 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR5AU1Q8NGC0 362 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LIPHQ8WWY8 451 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PLPPR2Q96GM1 343 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HSPB9Q9BQS6 159 aa9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ACANP16112 2415 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IGHV2-26A0A0B4J1V2 119 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NPIPA5A0A0B4J1W7 369 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IGLC7A0M8Q6 106 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 AQP7P3A6NL99 342 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RAMP3O60896 148 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 H2BFMP0C1H6 154 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TMEM187Q14656 261 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ARL6IP1Q15041 203 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LRRC10Q5BKY1 277 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 WDR73Q6P4I2 378 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 BHLHA15Q7RTS1 189 aaPredicted RBP9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 C17orf78Q8N4C9 275 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ST8SIA1Q92185 356 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PINX1Q96BK5 328 aaKnown RBP9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SMR3AQ99954 134 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MRPL22Q9NWU5 206 aaKnown RBP9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HIF3AQ9Y2N7 669 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RAI1Q7Z5J4 1906 aaPredicted RBP9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HEATR5AQ86XA9 2040 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SHISA8B8ZZ34 492 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TOX4O94842 621 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IFNA1P01562 189 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CD3EP07766 207 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 AADACP22760 399 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TSPOP30536 169 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TAS2R30P59541 319 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CD226Q15762 336 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MSMO1Q15800 293 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PLAC9Q5JTB6 97 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NIT1Q86X76 327 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 WFDC8Q8IUA0 241 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TCTEX1D1Q8N7M0 179 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 GATSQ8NAP1 163 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
TRAF3IP2-208ENST00000392556 FLNAP21333 2647 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 A0A0A6YYD4 124 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DUXBA0A1W2PPF3 345 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IGSF23A1L1A6 192 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SRSF10O75494 262 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NUDT14O95848 222 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RENP00797 406 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CSTAP01040 98 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ATP5J2P56134 94 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CSNK2A1P68400 391 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLC18B1Q6NT16 456 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 KCTD18Q6PI47 426 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 Q6ZT83 130 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 Q6ZVH6 145 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ZAR1Q86SH2 424 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CSNK2A3Q8NEV1 391 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ABHD14BQ96IU4 210 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 FBXO34Q9NWN3 711 aa9.59□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DNPH1O43598 174 aa9.58□□□□□ -0.88
TRAF3IP2-208ENST00000392556 RAD51DO75771 328 aa9.58□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PSG1P11464 419 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms