RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 CRYZL1O95825 349 aa20.22■□□□□ 0.83
HOMER3-202ENST00000392351 RPS16P62249 146 aaKnown RBP20.22■□□□□ 0.83
HOMER3-202ENST00000392351 SURF2Q15527 256 aaPredicted RBP20.22■□□□□ 0.83
HOMER3-202ENST00000392351 PLSCR3Q9NRY6 295 aa20.22■□□□□ 0.83
HOMER3-202ENST00000392351 AMY1AP04745 511 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 C5orf56Q8N8D9 126 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 RNF5Q99942 180 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 COL6A5A8TX70 2615 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 NAP1L6A6NFF2 107 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 CENPXA8MT69 81 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 RNF212BA8MTL3 300 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 NBR2O15453 112 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 FGF16O43320 207 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 PIGPP57054 158 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 BRWD1-AS2P59051 145 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 BLCAPP62952 87 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 C11orf88Q6PI97 169 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 Q6ZSV7 163 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 OR4S2Q8NH73 311 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 TMEM158Q8WZ71 300 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 HARBI1Q96MB7 349 aa20.21■□□□□ 0.83
HOMER3-202ENST00000392351 SH2D7A6NKC9 451 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-202ENST00000392351 SHOXO15266 292 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 CTSDP07339 412 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-202ENST00000392351 KIR2DS2P43631 304 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 TMEM177Q53S58 311 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 TBC1D26Q86UD7 250 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 SPAG16Q8N0X2 631 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 FAM71E2Q8N5Q1 922 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 Q8N9W7 124 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 POC5Q8NA72 575 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 C7orf50Q9BRJ6 194 aaKnown RBP20.2■□□□□ 0.82
HOMER3-202ENST00000392351 RANBP3Q9H6Z4 567 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-202ENST00000392351 KIAA1456Q9P272 454 aa20.2■□□□□ 0.82
HOMER3-202ENST00000392351 C14orf166Q9Y224 244 aaKnown RBP20.2■□□□□ 0.82
HOMER3-202ENST00000392351 RAMP3O60896 148 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 UPK1BO75841 260 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 HKR1P10072 659 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 RAG2P55895 527 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 NPBQ8NG41 125 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 TSNAXQ99598 290 aaKnown RBP20.19■□□□□ 0.82
HOMER3-202ENST00000392351 C19orf24Q9BVV8 132 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 COPZ2Q9P299 210 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 GPR132Q9UNW8 380 aa20.19■□□□□ 0.82
HOMER3-202ENST00000392351 PLA2G10O15496 165 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 F2RP25116 425 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 CCR6P51684 374 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 RND3P61587 244 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 OSR1Q8TAX0 266 aaPredicted RBP20.18■□□□□ 0.82
HOMER3-202ENST00000392351 SCGB3A2Q96PL1 93 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 RTBDNQ9BSG5 229 aaPredicted RBP20.18■□□□□ 0.82
HOMER3-202ENST00000392351 PRSS22Q9GZN4 317 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 C5orf66Q9H5L9 145 aa20.18■□□□□ 0.82
HOMER3-202ENST00000392351 LIN7CQ9NUP9 197 aaKnown RBP20.18■□□□□ 0.82
HOMER3-202ENST00000392351 MPPED1O15442 326 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 TSPAN9O75954 239 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 NDUFA3O95167 84 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 NDUFA7O95182 113 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 LGALS7P47929 136 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 Q6ZS46 218 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 CCDC71LQ8N9Z2 235 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 RASL11BQ9BPW5 248 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 ZNF702PQ9H963 129 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 VSIG4Q9Y279 399 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 RRHO14718 337 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 RBFOX2O43251 390 aaKnown RBP eCLIP20.17■□□□□ 0.82
HOMER3-202ENST00000392351 LYRM1O43325 122 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 PSG5Q15238 335 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 C9orf152Q5JTZ5 239 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 OR4F5Q8NH21 305 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 CD300LFQ8TDQ1 290 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 FBXL15Q9H469 300 aa20.17■□□□□ 0.82
HOMER3-202ENST00000392351 PLXNB1O43157 2135 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 SRRM4A7MD48 611 aaKnown RBP20.16■□□□□ 0.82
HOMER3-202ENST00000392351 SLC25A17O43808 307 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 SPDEFO95238 335 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 IGLV2-23P01705 113 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 BTCP35070 178 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 PLGLAQ15195 96 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 RBMS2Q15434 407 aaKnown RBP20.16■□□□□ 0.82
HOMER3-202ENST00000392351 C5orf64Q2M2E5 130 aa20.16■□□□□ 0.82
HOMER3-202ENST00000392351 SLC25A21Q9BQT8 299 aaPredicted RBP20.16■□□□□ 0.82
HOMER3-202ENST00000392351 ARSJQ5FYB0 599 aaPredicted RBP20.15■□□□□ 0.82
HOMER3-202ENST00000392351 METTL1Q9UBP6 276 aaKnown RBP20.15■□□□□ 0.82
HOMER3-202ENST00000392351 VSIG10L2P0DP72 767 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 IFITM3Q01628 133 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 Q8N2B8 174 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 TCTEX1D1Q8N7M0 179 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 OR2T6Q8NHC8 308 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 TSC22D3Q99576 134 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 TBC1D24Q9ULP9 559 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 SIGLEC9Q9Y336 463 aa20.14■□□□□ 0.81
HOMER3-202ENST00000392351 HPRT1P00492 218 aa20.13■□□□□ 0.81
HOMER3-202ENST00000392351 LINC01006Q8NI28 216 aa20.13■□□□□ 0.81
HOMER3-202ENST00000392351 C16orf95Q9H693 158 aa20.13■□□□□ 0.81
HOMER3-202ENST00000392351 TMEM89A2RUT3 159 aa20.12■□□□□ 0.81
HOMER3-202ENST00000392351 S1PR2O95136 353 aa20.12■□□□□ 0.81
HOMER3-202ENST00000392351 MDKP21741 143 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-202ENST00000392351 FOXL1Q12952 345 aa20.12■□□□□ 0.81
HOMER3-202ENST00000392351 VMA21Q3ZAQ7 101 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms