RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 C11orf88Q6PI97 169 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 Q6ZSV7 163 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 NPBQ8NG41 125 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 OR13C8Q8NGS7 320 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 MRGPRFQ96AM1 343 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 SCGB3A2Q96PL1 93 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 C19orf24Q9BVV8 132 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 KIAA1456Q9P272 454 aa11.88□□□□□ -0.51
SUMO1-203ENST00000392246 NAP1L6A6NFF2 107 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 CENPXA8MT69 81 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 NBR2O15453 112 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 AMY1AP04745 511 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 LGALS7P47929 136 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 RAG2P55895 527 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 KRTAP21-3Q3LHN1 58 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 OR2B11Q5JQS5 317 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 Q8N9W7 124 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 POC5Q8NA72 575 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 OR51H1Q8NH63 302 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
SUMO1-203ENST00000392246 TSNAXQ99598 290 aaKnown RBP11.87□□□□□ -0.51
SUMO1-203ENST00000392246 RASL11BQ9BPW5 248 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 C7orf50Q9BRJ6 194 aaKnown RBP11.87□□□□□ -0.51
SUMO1-203ENST00000392246 SLC2A9Q9NRM0 540 aa11.87□□□□□ -0.51
SUMO1-203ENST00000392246 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 TMEM89A2RUT3 159 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 SHOXO15266 292 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 PEX14O75381 377 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 CRYZL1O95825 349 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 RLN1P04808 185 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 CTSDP07339 412 aaPredicted RBP11.86□□□□□ -0.51
SUMO1-203ENST00000392246 CNTFRP26992 372 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 RND3P61587 244 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 FOXL1Q12952 345 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 SPAG16Q8N0X2 631 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 FAM71E2Q8N5Q1 922 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
SUMO1-203ENST00000392246 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 HARBI1Q96MB7 349 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 C16orf95Q9H693 158 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 LIN7CQ9NUP9 197 aaKnown RBP11.86□□□□□ -0.51
SUMO1-203ENST00000392246 GPR132Q9UNW8 380 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 C14orf166Q9Y224 244 aaKnown RBP11.86□□□□□ -0.51
SUMO1-203ENST00000392246 RRHO14718 337 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
SUMO1-203ENST00000392246 NDUFA3O95167 84 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 SPDEFO95238 335 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 PI3P19957 117 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 PIGPP57054 158 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 BRWD1-AS2P59051 145 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 TBC1D26Q86UD7 250 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 Q8N2B8 174 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 CCDC71LQ8N9Z2 235 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 ZNF702PQ9H963 129 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
SUMO1-203ENST00000392246 FBN1P35555 2871 aaKnown RBP11.85□□□□□ -0.51
SUMO1-203ENST00000392246 A0A1B0GUS0 222 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 MPPED1O15442 326 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 F2RP25116 425 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 PSG5Q15238 335 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 C5orf64Q2M2E5 130 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 C9orf152Q5JTZ5 239 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 OR2T6Q8NHC8 308 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 LINC01006Q8NI28 216 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 SLC25A21Q9BQT8 299 aaPredicted RBP11.85□□□□□ -0.51
SUMO1-203ENST00000392246 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
SUMO1-203ENST00000392246 C5orf66Q9H5L9 145 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 BEX1Q9HBH7 125 aa11.85□□□□□ -0.51
SUMO1-203ENST00000392246 SH2D7A6NKC9 451 aaPredicted RBP11.84□□□□□ -0.51
SUMO1-203ENST00000392246 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
SUMO1-203ENST00000392246 RAMP3O60896 148 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 UPK1BO75841 260 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 HPRT1P00492 218 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 PLGLAQ15195 96 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
SUMO1-203ENST00000392246 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 Q6ZS46 218 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 FBXL15Q9H469 300 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 FAM212BQ9NTI7 297 aaPredicted RBP11.84□□□□□ -0.51
SUMO1-203ENST00000392246 METTL1Q9UBP6 276 aaKnown RBP11.84□□□□□ -0.51
SUMO1-203ENST00000392246 MMP24Q9Y5R2 645 aa11.84□□□□□ -0.51
SUMO1-203ENST00000392246 CLPSL1A2RUU4 121 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 PLA2G10O15496 165 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 LYRM1O43325 122 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 SLC25A17O43808 307 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 HRASP01112 189 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
SUMO1-203ENST00000392246 VMA21Q3ZAQ7 101 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 AIFM2Q9BRQ8 373 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 PLEKHA2Q9HB19 425 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 VSIG4Q9Y279 399 aa11.83□□□□□ -0.52
SUMO1-203ENST00000392246 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms