RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
COL6A3-204ENST00000392003 TMEM171Q8WVE6 324 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 PSENENQ9NZ42 101 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 ZFP30Q9Y2G7 519 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 WIPI2Q9Y4P8 454 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 FREM2Q5SZK8 3169 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 H0YL77 283 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.12□□□□□ -1.11
COL6A3-204ENST00000392003 CHRNB4P30926 498 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 FABP6P51161 128 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 HBG1P69891 147 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 HBG2P69892 147 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 RPL19P84098 196 aaKnown RBP8.12□□□□□ -1.11
COL6A3-204ENST00000392003 CATR1Q13166 79 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
COL6A3-204ENST00000392003 TESK1Q15569 626 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 MSMO1Q15800 293 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 CXorf67Q86X51 503 aaPredicted RBP8.12□□□□□ -1.11
COL6A3-204ENST00000392003 HIPK2Q9H2X6 1198 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 WSB1Q9Y6I7 421 aa8.12□□□□□ -1.11
COL6A3-204ENST00000392003 CELSR3Q9NYQ7 3312 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 RBFOX3A6NFN3 312 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 TMEM50AO95807 157 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 WNT2P09544 360 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 IAPPP10997 89 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 GABRA2P47869 451 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 TAS2R30P59541 319 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 TMEM267Q0VDI3 215 aaPredicted RBP8.11□□□□□ -1.11
COL6A3-204ENST00000392003 VWA1Q6PCB0 445 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 ZBTB34Q8NCN2 500 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 MBNL3Q9NUK0 354 aaKnown RBP8.11□□□□□ -1.11
COL6A3-204ENST00000392003 CEP295Q9C0D2 2601 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 A0A0G2JRQ6 117 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 OOEPA6NGQ2 149 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 CYB5BO43169 146 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 BRI3O95415 125 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 KIR2DL2P43627 348 aaPredicted RBP8.11□□□□□ -1.11
COL6A3-204ENST00000392003 CEBPGP53567 150 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 RUNX1Q01196 453 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 RTP5Q14D33 572 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 IZUMO4Q1ZYL8 232 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF343Q6P1L6 599 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 ERASQ7Z444 233 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 DRAM1Q8N682 238 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 C9orf106Q8NAJ2 232 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 TXN2Q99757 166 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 RNF115Q9Y4L5 304 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 WDFY3Q8IZQ1 3526 aa8.11□□□□□ -1.11
COL6A3-204ENST00000392003 A0A1B0GW64 132 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 FAM157AC9JC47 383 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 WISP2O76076 250 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 CEBPDP49716 269 aaPredicted RBP8.1□□□□□ -1.11
COL6A3-204ENST00000392003 SMIM21Q3B7S5 101 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 SLC35E4Q6ICL7 350 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 DPPA3Q6W0C5 159 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF826PQ6ZT77 177 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 KIAA1456Q9P272 454 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 NDUFB8O95169 186 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 PAX9P55771 341 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 SCGB2A2Q13296 93 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 RHEBQ15382 184 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 ASCL5Q7RTU5 278 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 CORO2AQ92828 525 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 RBMXL1Q96E39 390 aaKnown RBP8.1□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF292O60281 2723 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 IGKV3-15P01624 115 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 KLF3P57682 345 aaPredicted RBP8.1□□□□□ -1.11
COL6A3-204ENST00000392003 HTD2P86397 168 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 HAGHQ16775 308 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 WDR31Q8NA23 367 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 OR1L1Q8NH94 360 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 ABHD14AQ9BUJ0 271 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 OR2D2Q9H210 308 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 URGCP-MRPS24S4R325 110 aa8.1□□□□□ -1.11
COL6A3-204ENST00000392003 WNT9BO14905 357 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 TRGC2P03986 189 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 CECR9P0C854 216 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 COX5AP20674 150 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 AESQ08117 197 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 SPANXN5Q5MJ07 72 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 PRAMEF6Q5VXH4 476 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 HEPN1Q6WQI6 88 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 C1orf174Q8IYL3 243 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF808Q8N4W9 903 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF645Q8N7E2 425 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF610Q8N9Z0 462 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 MALSU1Q96EH3 234 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 TAAR6Q96RI8 345 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 FZR1Q9UM11 496 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 RBMXL2O75526 392 aaKnown RBP8.09□□□□□ -1.11
COL6A3-204ENST00000392003 CXCL1P09341 107 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 P2RY6Q15077 328 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 ACSF3Q4G176 576 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-204ENST00000392003 IGFL2Q6UWQ7 119 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 ACP7Q6ZNF0 438 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 ZNF479Q96JC4 524 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 RARRES2Q99969 163 aa8.09□□□□□ -1.11
COL6A3-204ENST00000392003 PIEZO2Q9H5I5 2752 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms