RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CDKL2Q92772 493 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 NAT6Q93015 286 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 PPWD1Q96BP3 646 aaKnown RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 ZMYND19Q96E35 227 aaPredicted RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 ZC2HC1AQ96GY0 325 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 NMNAT3Q96T66 252 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 BPIFA3Q9BQP9 254 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 C11orf70Q9BRQ4 267 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 DCSTAMPQ9H295 470 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 BLZF1Q9H2G9 400 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 SDHAF2Q9NX18 166 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 MS4A12Q9NXJ0 267 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 POLR3HQ9Y535 204 aaPredicted RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 U3KQA8 63 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 MTUS2Q5JR59 1369 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TRBV6-8A0A0A6YYG3 113 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MGAT4DA6NG13 374 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 K7EN84 100 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 AKR7A2O43488 359 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 GSTZ1O43708 216 aaPredicted RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 CYTH3O43739 400 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 FADS1O60427 444 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 GMDSO60547 372 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 NOS1APO75052 506 aaPredicted RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 IGLV3-27P01718 113 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 GIMD1P0DJR0 217 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MSNP26038 577 aaKnown RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 CCT6AP40227 531 aaKnown RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 OR1E2P47887 323 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 FXYD7P58549 80 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 LINC00313P59037 77 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TSPAN5P62079 268 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 PSMC5P62195 406 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 PSG9Q00887 426 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF345Q14585 488 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 RCN1Q15293 331 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MPV17LQ2QL34 196 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 ACSM3Q53FZ2 586 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 CENPWQ5EE01 88 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 HBMQ6B0K9 141 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 KRTAP26-1Q6PEX3 210 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 ULK3Q6PHR2 472 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MRPL21Q7Z2W9 205 aaKnown RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 FAM19A1Q7Z5A9 133 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 PLCZ1Q86YW0 608 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 BAP18Q8IXM2 172 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 LINC00471Q8N535 108 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 FBXO36Q8NEA4 188 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 CCDC148Q8NFR7 591 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 OR2AE1Q8NHA4 323 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MITD1Q8WV92 249 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TSEN15Q8WW01 171 aaKnown RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 ACOT12Q8WYK0 555 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 RNASE6Q93091 150 aaKnown RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 SFRP2Q96HF1 295 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 PGLYRP3Q96LB9 341 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 PLIN2Q99541 437 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 NKX6-2Q9C056 277 aaPredicted RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 NDEL1Q9GZM8 345 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM222Q9H0R3 208 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TLNRD1Q9H1K6 362 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 OR2AG1Q9H205 316 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 CDC42SE1Q9NRR8 79 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 ACER3Q9NUN7 267 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MRPL22Q9NWU5 206 aaKnown RBP-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TAS2R13Q9NYV9 303 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 AHSPQ9NZD4 102 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM216Q9P0N5 145 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 LOC285556D6RIA3 1793 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 MUC12Q9UKN1 5478 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 SCN3AQ9NY46 2000 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 TTC21AQ8NDW8 1320 aa-0.4□□□□□ -2.47
SNORD28-201ENST00000384706 ZANQ9Y493 2812 aa-0.41□□□□□ -2.47
SNORD28-201ENST00000384706 FLNAP21333 2647 aaKnown RBP-0.41□□□□□ -2.47
SNORD28-201ENST00000384706 CCDC88AQ3V6T2 1871 aa-0.41□□□□□ -2.47
SNORD28-201ENST00000384706 RAB3GAP2Q9H2M9 1393 aa-0.41□□□□□ -2.47
SNORD28-201ENST00000384706 A0A087WUU8 490 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 TRBV10-2A0A0K0K1G8 114 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 NUPR2A6NF83 97 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 C2orf70A6NJV1 201 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 C10orf142B7Z368 130 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 M0QYV0 167 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 POLR3GO15318 223 aaPredicted RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 CCL25O15444 150 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OR1I1O60431 355 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 SHOX2O60902 331 aaPredicted RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OR5F1O95221 314 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 VAPBO95292 243 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 EPPINO95925 133 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 TFPTP0C1Z6 253 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 ASAH2BP0C7U1 165 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 METTL15P1P0C7V9 234 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 SRMP19623 302 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 OR10J1P30954 320 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 RCVRNP35243 200 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 CA7P43166 264 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 RPS5P46782 204 aaKnown RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 NKX2-5P52952 324 aaPredicted RBP-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 FXYD6P3P58550 94 aa-0.41□□□□□ -2.48
SNORD28-201ENST00000384706 DSTNP60981 165 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms