RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 ZIC1Q15915 447 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 IZUMO4Q1ZYL8 232 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 ACSM6Q6P461 480 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 CLDND2Q8NHS1 167 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 MRPL16Q9NX20 251 aaKnown RBP4.25□□□□□ -1.73
PTPRD-203ENST00000381196 OR1A1Q9P1Q5 309 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF835Q9Y2P0 537 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 OOEPA6NGQ2 149 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 C21orf140B9A014 251 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 F8W1H4 67 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 M0R135 149 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 HLA-DRB4P13762 266 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 TTC32Q5I0X7 151 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 C6orf201Q7Z4U5 140 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF683Q8IZ20 524 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 PATE1Q8WXA2 126 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 UBE2FQ969M7 185 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 CLDN23Q96B33 292 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF799Q96GE5 643 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 OR4C12Q96R67 309 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 MSL2Q9HCI7 577 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 OR6C3Q9NZP0 311 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 MOB4Q9Y3A3 225 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 HLA-DRB4X5D2U9 266 aa4.25□□□□□ -1.73
PTPRD-203ENST00000381196 A0A1B0GTH9 108 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 RAMP3O60896 148 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 FCGR3AP08637 254 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 RD3LP0DJH9 198 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 MGAT2Q10469 447 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CD226Q15762 336 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 VMA21Q3ZAQ7 101 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PHLDA2Q53GA4 152 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TCF24Q7RTU0 167 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CT55Q8WUE5 264 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SPSB4Q96A44 273 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 MS4A18H0YCH9 400 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 F13BP05160 661 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ESDP10768 282 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 MS4A18Q3C1V0 323 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ALG14Q96F25 216 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 LRP12Q9Y561 859 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 A0A096LPE4 126 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TRAV38-1A0A0B4J264 116 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 A0A1W2PPZ6 126 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CCL1P22362 96 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 HBBP68871 147 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM123Q8N131 208 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM116Q8NCL8 245 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SMRP1Q8NCR6 262 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BLQ99880 126 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TNFSF11O14788 317 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ZFP36L2P47974 494 aaKnown RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 GUCD1Q96NT3 240 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SMIM14Q96QK8 99 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SLCO1C1Q9NYB5 712 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TAAR3PQ9P1P4 343 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 IGHV1OR15-9A0A0B4J2B8 117 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CD5LO43866 347 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 HPXP02790 462 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ACAA2P42765 397 aaKnown RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF83P51522 516 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 DTX3Q8N9I9 347 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SP7Q8TDD2 431 aaPredicted RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PIMREGQ9BSJ6 248 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM126AQ9H061 195 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 BTCP35070 178 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TDGF1P3P51864 188 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 H2BFSP57053 126 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 FBLN7Q53RD9 439 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 RNFT1Q5M7Z0 435 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TIMM23BQ5SRD1 257 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ASCL5Q7RTU5 278 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SH3BGRL3Q9H299 93 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 THYN1Q9P016 225 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CHD8Q9HCK8 2581 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 SAA2-SAA4A0A096LPE2 208 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 KBTBD11-OT1A0A1B0GTJ5 212 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 DPRXA6NFQ7 191 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF785A8K8V0 405 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 F2RL2O00254 374 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 MOSPD3O75425 235 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PPP1CCP36873 323 aaKnown RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 RAE1P78406 368 aaKnown RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PRICKLE4Q2TBC4 344 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ANKRD39Q53RE8 183 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PAQR6Q6TCH4 344 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PLPP7Q8NBV4 271 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 WFDC5Q8TCV5 224 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 AMMECR1Q9Y4X0 333 aaPredicted RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 THSD7BQ9C0I4 1608 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 TRBV6-6A0A0A6YYG2 114 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CACNG8Q8WXS5 425 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 MRM2Q9UI43 246 aaKnown RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ERRFI1Q9UJM3 462 aaPredicted RBP4.24□□□□□ -1.73
PTPRD-203ENST00000381196 PCOLCE2Q9UKZ9 415 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 ANAPC10Q9UM13 185 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 WDR87Q6ZQQ6 2873 aa4.24□□□□□ -1.73
PTPRD-203ENST00000381196 CLDN14O95500 239 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms