RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 PSG5Q15238 335 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 H1FOOQ8IZA3 346 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-203ENST00000380877 UCP1P25874 307 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 WDR82Q6UXN9 313 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 VAX2Q9UIW0 290 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.35□□□□□ -0.757e-11■■■■■ 55.5
GABPB1-203ENST00000380877 FAM208BQ5VWN6 2430 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 C11orf94C9JXX5 98 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 SLC25A17O43808 307 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 HSPE1P61604 102 aaKnown RBP10.35□□□□□ -0.75
GABPB1-203ENST00000380877 OR4X1Q8NH49 305 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 BSCL2Q96G97 398 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-203ENST00000380877 ASCL3Q9NQ33 180 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 ACACBO00763 2458 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-203ENST00000380877 G3V3Q6 166 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 LDLRAD4O15165 306 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 HTR1DP28221 377 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 HIST1H3AP68431 136 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 FABP9Q0Z7S8 132 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 FAM90A1Q86YD7 464 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
GABPB1-203ENST00000380877 OTOGLQ3ZCN5 2332 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 RAB4AP20338 218 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 FOXL2NBQ6ZUU3 175 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 ZCCHC24Q8N2G6 241 aaKnown RBP10.34□□□□□ -0.75
GABPB1-203ENST00000380877 LRRK1Q38SD2 2015 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 IGKV1-27A0A075B6S5 117 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 TRAV24A0A0B4J272 114 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 CHEK1O14757 476 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 ZG16O60844 167 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 SCGB1D1O95968 90 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 LIPFP07098 398 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 SPP1P10451 314 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 SRP14P37108 136 aaKnown RBP10.34□□□□□ -0.75
GABPB1-203ENST00000380877 GNG4P50150 75 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 LY6DQ14210 128 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 RPL39P5Q59GN2 51 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 PDZD11Q5EBL8 140 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 DHRS7BQ6IAN0 325 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-203ENST00000380877 MYPOPQ86VE0 399 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-203ENST00000380877 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 OR4C12Q96R67 309 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 PIEZO1Q92508 2521 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 IGHV3-21A0A0B4J1V1 117 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 XKRY2A2RUG3 117 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 RND3P61587 244 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 C1QTNF12Q5T7M4 302 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 GTF3AQ92664 365 aaKnown RBP10.34□□□□□ -0.75
GABPB1-203ENST00000380877 SPSB4Q96A44 273 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 TNFRSF19Q9NS68 423 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 TCF19Q9Y242 345 aa10.34□□□□□ -0.75
GABPB1-203ENST00000380877 PAGE4O60829 102 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 ZNF735P0CB33 412 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 DTX1Q86Y01 620 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 SEC11CQ9BY50 192 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 ATP5J2P56134 94 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 AWAT1Q58HT5 328 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 CLEC7AQ9BXN2 247 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 METTL1Q9UBP6 276 aaKnown RBP10.33□□□□□ -0.76
GABPB1-203ENST00000380877 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 TRBV6-7A0A0A0MS04 114 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 BSXQ3C1V8 233 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 RNF144BQ7Z419 303 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 ZGRF1Q86YA3 2104 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 PDPNQ86YL7 162 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 TAF15Q92804 592 aaKnown RBP eCLIP10.33□□□□□ -0.76
GABPB1-203ENST00000380877 MPDU1O75352 247 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 PTBP3O95758 552 aaKnown RBP10.33□□□□□ -0.76
GABPB1-203ENST00000380877 PNRC1Q12796 327 aaPredicted RBP10.33□□□□□ -0.76
GABPB1-203ENST00000380877 OR5I1Q13606 314 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 OR4C13Q8NGP0 309 aa10.33□□□□□ -0.76
GABPB1-203ENST00000380877 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-203ENST00000380877 MBD3L3A6NE82 208 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-203ENST00000380877 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-203ENST00000380877 MPTX1A8MV57 137 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 CLN5O75503 358 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 KBTBD11O94819 623 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 ECSCRQ19T08 205 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 HCP5Q6MZN7 132 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 MBD3L2Q8NHZ7 208 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-203ENST00000380877 OBSL1O75147 1896 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 IGKV1D-13A0A0B4J2D9 117 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 KBTBD11-OT1A0A1B0GTJ5 212 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 MSGN1A6NI15 193 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 IGKV1-13P0DP09 117 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 NAT1P18440 290 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 USF1P22415 310 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-203ENST00000380877 ZNF439Q8NDP4 499 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 TDGF1P13385 188 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 OR10J1P30954 320 aa10.32□□□□□ -0.76
GABPB1-203ENST00000380877 DPPA3Q6W0C5 159 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms