RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 IGHV3-43DP0DP04 118 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 DMRTC2Q8IXT2 367 aaPredicted RBP13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 KLF14Q8TD94 323 aaPredicted RBP13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 RAB24Q969Q5 203 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 HSPB7Q9UBY9 170 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 TIMM8AO60220 97 aaPredicted RBP13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 RBMXL2O75526 392 aaKnown RBP13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 WNT2P09544 360 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 NPPCP23582 126 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 PSMB3P49720 205 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 PKIAP61925 76 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 Q6ZR03 302 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 FUT9Q9Y231 359 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 SMG1Q96Q15 3661 aaKnown RBP13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 DEFB108AA8MXU0 73 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 GABRA6Q16445 453 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 MOB1BQ7L9L4 216 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 RFESDQ8TAC1 157 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 PMS2P5A8MQ11 134 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 IGHV3-13P01766 116 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 GNB2P62879 340 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 AGMATQ9BSE5 352 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 APC2O95996 2303 aa13.59□□□□□ -0.23
NKX3-1-201ENST00000380871 MUC6Q6W4X9 2439 aa13.58□□□□□ -0.23
NKX3-1-201ENST00000380871 TRAV17A0A0B4J275 112 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 LRRC30A6NM36 301 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 PPP5D1E7EU14 171 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 SNRPCP09234 159 aaKnown RBP13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 CHRNA7P36544 502 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 SSX9Q7RTT3 188 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 MRGPRDQ8TDS7 321 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 PGPEP1LA6NFU8 196 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 TSTD3H0UI37 97 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 HAND1O96004 215 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 GYPAP02724 150 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 FAM3BP58499 235 aaPredicted RBP13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 UBE2G2P60604 165 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 PIP4P1Q86T03 277 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 RPRMLQ8N4K4 120 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 ZNF645Q8N7E2 425 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 DTD1Q8TEA8 209 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 TAAR6Q96RI8 345 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 DERL1Q9BUN8 251 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 NPCDR1Q9BY65 106 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 CTXND1A0A1B0GTU2 59 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 A0A1B0GUS0 222 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 ZNF705GA8MUZ8 300 aaPredicted RBP13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 SSTR5P35346 364 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 ACSF3Q4G176 576 aaPredicted RBP13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 PYGO2Q9BRQ0 406 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 CLCF1Q9UBD9 225 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 WIPI2Q9Y4P8 454 aa13.58□□□□□ -0.24
NKX3-1-201ENST00000380871 SH2D1BO14796 132 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 P0C879 139 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 EDDM3AQ14507 147 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 REC114Q7Z4M0 266 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 OR5B12Q96R08 314 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 TMEM147Q9BVK8 224 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 POLEQ07864 2286 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 TRAV38-1A0A0B4J264 116 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 HBZP02008 142 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 NDUFB7P17568 137 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 ZNF146Q15072 292 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 PARD6GQ9BYG4 376 aaPredicted RBP13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 SH3BGRL2Q9UJC5 107 aa13.57□□□□□ -0.24
NKX3-1-201ENST00000380871 LINC00473A8K010 186 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 ZNF83P51522 516 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 JOSD1Q15040 202 aaPredicted RBP13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 OR10P1Q8NGE3 313 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 GALMQ96C23 342 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 TMEM204Q9BSN7 226 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 DCTN5Q9BTE1 182 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 HRASP01112 189 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 GABRA2P47869 451 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 NUBP1P53384 320 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 Q6ZT83 130 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 RYDENQ9NUL5 291 aaKnown RBP13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 POLDIP2Q9Y2S7 368 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 TIMM9Q9Y5J7 89 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 PIGBOS1A0A0B4J2F0 54 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 FAM90A26D6RGX4 464 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 TGOLN2O43493 480 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 CECR9P0C854 216 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 RAC2P15153 192 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 ATP5G3P48201 142 aa13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 CENPVQ7Z7K6 275 aaPredicted RBP13.56□□□□□ -0.24
NKX3-1-201ENST00000380871 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 ST8SIA5O15466 376 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 COQ2Q96H96 371 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 WASF3Q9UPY6 502 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 DCHS1Q96JQ0 3298 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 K7EM74 188 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 MLNRO43193 412 aa13.55□□□□□ -0.24
NKX3-1-201ENST00000380871 EIF4EBP1Q13541 118 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms