RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ACP1P24666 158 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 FKBP2P26885 142 aaKnown RBP9.34□□□□□ -0.91
CLCN4-202ENST00000380833 Q8NFD4 153 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 EPDR1Q9UM22 224 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 KNTC1P50748 2209 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 TRAV38-1A0A0B4J264 116 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 IGHV3-35A0A0C4DH35 117 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 OR1K1Q8NGR3 316 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF385AQ96PM9 386 aaKnown RBP9.34□□□□□ -0.91
CLCN4-202ENST00000380833 CXXC4Q9H2H0 198 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 MBNL3Q9NUK0 354 aaKnown RBP9.34□□□□□ -0.91
CLCN4-202ENST00000380833 TSPAN2O60636 221 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 DPTQ07507 201 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 IGFBP7Q16270 282 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 N4BP2Q86UW6 1770 aaPredicted RBP9.34□□□□□ -0.91
CLCN4-202ENST00000380833 CTSVO60911 334 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 CD5P06127 495 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 GPR6P46095 362 aaPredicted RBP9.34□□□□□ -0.91
CLCN4-202ENST00000380833 LRRC75BQ2VPJ9 315 aa9.34□□□□□ -0.91
CLCN4-202ENST00000380833 ZNF707Q96C28 371 aaPredicted RBP9.34□□□□□ -0.91
CLCN4-202ENST00000380833 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 STPG1Q5TH74 334 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 GAGE2AQ6NT46 116 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 KIR3DL2P43630 455 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 KISS1Q15726 138 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 GFI1BQ5VTD9 330 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
CLCN4-202ENST00000380833 C11orf44Q8N8P7 122 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 A0A1W2PQM1 296 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 VDAC1P21796 283 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 H2BFSP57053 126 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 RAE1P78406 368 aaKnown RBP9.33□□□□□ -0.92
CLCN4-202ENST00000380833 LHX8Q68G74 356 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 CCL19Q99731 98 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 MRPS11P82912 194 aaKnown RBP9.33□□□□□ -0.92
CLCN4-202ENST00000380833 NT5CQ8TCD5 201 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 RRHO14718 337 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 FFAR1O14842 300 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV3-23P01764 117 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 CELA2AP08217 269 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 ATP5J2P56134 94 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 ZNF488Q96MN9 340 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 KLHDC3Q9BQ90 382 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 V9GYY9 64 aa9.33□□□□□ -0.92
CLCN4-202ENST00000380833 TBX6O95947 436 aaPredicted RBP9.32□□□□□ -0.92
CLCN4-202ENST00000380833 DMKNQ6E0U4 476 aaPredicted RBP9.32□□□□□ -0.92
CLCN4-202ENST00000380833 FAM181AQ8N9Y4 354 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 OR10AC1Q8NH08 325 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 RAXQ9Y2V3 346 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 EVPLQ92817 2033 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 J3KT08 172 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 MLNRO43193 412 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 RUNX1Q01196 453 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 PRSS8Q16651 343 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 PRNTQ86SH4 94 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM126AQ9H061 195 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 NUP188Q5SRE5 1749 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
CLCN4-202ENST00000380833 A0A1B0GU03 582 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 C17orf47Q8NEP4 570 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 OR9G4Q8NGQ1 327 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 UCN2Q96RP3 112 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 NEUROG3Q9Y4Z2 214 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 IGLV3-10A0A075B6K4 115 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV3-66A0A0C4DH42 116 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 ZNF519Q8TB69 540 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 SMIM8Q96KF7 97 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 NKX2-6A6NCS4 301 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 FAM60AQ9NP50 221 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 CD8AP01732 235 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 KIR2DS2P43631 304 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 FAM53BQ14153 422 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 LYZL2Q7Z4W2 148 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 VSTM2LQ96N03 204 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 TNFRSF12AQ9NP84 129 aa9.32□□□□□ -0.92
CLCN4-202ENST00000380833 RAMP1O60894 148 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 SRP19P09132 144 aaKnown RBP9.31□□□□□ -0.92
CLCN4-202ENST00000380833 CCL3P10147 92 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 ADMP35318 185 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 PRB3Q04118 309 aaPredicted RBP9.31□□□□□ -0.92
CLCN4-202ENST00000380833 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 PGLYRP4Q96LB8 373 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 SHROOM3Q8TF72 1996 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 NINQ8N4C6 2090 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV3OR16-13A0A075B7E8 117 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 IGHV3-74A0A0B4J1X5 117 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 DLX4Q92988 240 aaPredicted RBP9.31□□□□□ -0.92
CLCN4-202ENST00000380833 SNRNP40Q96DI7 357 aaKnown RBP9.31□□□□□ -0.92
CLCN4-202ENST00000380833 CACNA1SQ13698 1873 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 CD300LDQ6UXZ3 194 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 SLC25A40Q8TBP6 338 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 BCL2L10Q9HD36 194 aa9.31□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM250H0YL14 139 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms