RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 MARCH11A6NNE9 402 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 LINC01565O15544 149 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 HOXA5P20719 270 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 TCF23Q7RTU1 214 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 ARL17AQ8IVW1 177 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 A0A1B0GV90 55 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 A0A1W2PR80 420 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 WNT9BO14905 357 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 OR2H2O95918 312 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 C16orf47Q6ZP98 133 aaPredicted RBP8.25□□□□□ -1.09
SNX1-202ENST00000380285 DUSP15Q9H1R2 295 aaPredicted RBP8.25□□□□□ -1.09
SNX1-202ENST00000380285 PI4KAP42356 2102 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 SCTP09683 121 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 AUP1Q9Y679 476 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 A1L4Q6 167 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 NUDT3O95989 172 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 ZNF502Q8TBZ5 544 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 IGKV1-8A0A0C4DH67 115 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 SS18L1O75177 396 aaPredicted RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 MAGEA5P43359 124 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 WDYHV1Q96HA8 205 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 TMEM140Q9NV12 185 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 AURKAIP1Q9NWT8 199 aaPredicted RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 IL36BQ9NZH7 164 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 LHFPL6Q9Y693 200 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 IGHV5-10-1A0A0J9YXX1 117 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 SAPCD1Q5SSQ6 148 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CTHRC1Q96CG8 243 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CDX4O14627 284 aaPredicted RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 IL4P05112 153 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 NUBP1P53384 320 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 C10orf128Q5T292 105 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 FHL5Q5TD97 284 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 PIMREGQ9BSJ6 248 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 PPIAL4EA0A075B759 164 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 PPIAL4DF5H284 164 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CELA2BP08218 269 aaPredicted RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 PPIAL4FP0DN26 164 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 UCP2P55851 309 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 LINC01590Q5TEZ4 76 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 PPIAL4AQ9Y536 164 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 KLF4O43474 513 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 ZNF841Q6ZN19 808 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 TNFRSF19Q9NS68 423 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CHD3Q12873 2000 aaKnown RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 FANCMQ8IYD8 2048 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 SMIM10L1P0DMW3 83 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 SOX8P57073 446 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 MMDQ15546 238 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 SMIM10Q96HG1 83 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 CENPVL1A0A0U1RR11 272 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 FAM53AQ6NSI3 398 aaPredicted RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 ZNF385AQ96PM9 386 aaKnown RBP8.24□□□□□ -1.09
SNX1-202ENST00000380285 SH3BGRL3Q9H299 93 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 DTX4Q9Y2E6 619 aa8.24□□□□□ -1.09
SNX1-202ENST00000380285 SHISA5Q8N114 240 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 OR4C13Q8NGP0 309 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 LTBP4Q8N2S1 1624 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 MPZP25189 248 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 NRN1LQ496H8 165 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 NIT1Q86X76 327 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 PGPA6NDG6 321 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 MOSPD3O75425 235 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 MIC13Q5XKP0 118 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.23□□□□□ -1.09
SNX1-202ENST00000380285 KCNS1Q96KK3 526 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 DLL3Q9NYJ7 618 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 TMEM56-RWDD3S4R434 201 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 LAMTOR1Q6IAA8 161 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 YLPM1P49750 1951 aaKnown RBP8.23□□□□□ -1.09
SNX1-202ENST00000380285 ATP5LO75964 103 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 ZP1P60852 638 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 FOXJ2Q9P0K8 574 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 MBD1Q9UIS9 605 aaPredicted RBP8.23□□□□□ -1.09
SNX1-202ENST00000380285 A0A1W2PQM1 296 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 KLK10O43240 276 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 MRPL13Q9BYD1 178 aaKnown RBP8.23□□□□□ -1.09
SNX1-202ENST00000380285 FAM186AA6NE01 2351 aa8.23□□□□□ -1.09
SNX1-202ENST00000380285 ODAMA1E959 279 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 GCHFRP30047 84 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 UQCRFS1P47985 274 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 RELQ04864 619 aaPredicted RBP8.22□□□□□ -1.09
SNX1-202ENST00000380285 C16orf97H3BN30 126 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 UBE2CO00762 179 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 MFAP4P55083 255 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 IGLV3-21P80748 117 aaPredicted RBP8.22□□□□□ -1.09
SNX1-202ENST00000380285 FAM131CQ96AQ9 280 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 CLDN16Q9Y5I7 305 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 GREB1Q4ZG55 1949 aa8.22□□□□□ -1.09
SNX1-202ENST00000380285 SRP19P09132 144 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms