RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ID3Q02535 119 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 CYP2G1PQ6ZSU1 146 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 Q8NFD4 153 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 OR4C12Q96R67 309 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 DMXL1Q9Y485 3027 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 KIR2DS1A0A191URI9 304 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 WNT9BO14905 357 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 SYNGR2O43760 224 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 KIR2DS1Q14954 304 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 DCAF12Q5T6F0 453 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 OR4C5Q8NGB2 326 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 MRPL30Q8TCC3 161 aaKnown RBP10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 IMMP2LQ96T52 175 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 TXN2Q99757 166 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 PARLQ9H300 379 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 SLC39A9Q9NUM3 307 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 OR2W1Q9Y3N9 320 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 LOXL2Q9Y4K0 774 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 RNF114Q9Y508 228 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 ATP23Q9Y6H3 246 aa10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 COL5A1P20908 1838 aaPredicted RBP10.52□□□□□ -0.73
PRPF40B-202ENST00000380281 RAMP3O60896 148 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 MT-CO3P00414 261 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 ACACAQ13085 2346 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 UBE2V1Q13404 147 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 Q6ZN92 141 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 CISD2Q8N5K1 135 aaKnown RBP10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 MED13LQ71F56 2210 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 PRSS47A8MTI9 375 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 IGKV1-39P01597 117 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 IGKV1D-39P04432 117 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 UCP1P25874 307 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 KRTDAPP60985 99 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 SRPXP78539 464 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 CEACAM21Q3KPI0 293 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 PMS2CLQ68D20 193 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 TMEM56Q96MV1 263 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 C1QTNF5Q9BXJ0 243 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 CLEC18AA5D8T8 446 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 F2Z2F3 143 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 LYZL6O75951 148 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 NAPSAO96009 420 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 CRYAAP02489 173 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 ADMP35318 185 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 TGFBR3Q03167 851 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 SAXO1Q8IYX7 474 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 CLEC18CQ8NCF0 446 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 KCNE4Q8WWG9 221 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
PRPF40B-202ENST00000380281 ADGRG4Q8IZF6 3080 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 KBTBD11O94819 623 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 ASCL4Q6XD76 172 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 OR4F5Q8NH21 305 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 OR4F4Q96R69 305 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 RPH3ALQ9UNE2 315 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 LAMTOR2Q9Y2Q5 125 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 K7EP13 123 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 GYPAP02724 150 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 MEF2BQ02080 365 aaPredicted RBP10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 AESQ08117 197 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 EDDM3AQ14507 147 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 MRGPRGQ86SM5 289 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 NUDT10Q8NFP7 164 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 APOBEC3DQ96AK3 386 aaPredicted RBP10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 DCTN5Q9BTE1 182 aa10.5□□□□□ -0.73
PRPF40B-202ENST00000380281 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 SERF1AO75920 110 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 BAXQ07812 192 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 OR1C1Q15619 314 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 SPATA45Q537H7 98 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 FFAR4Q5NUL3 377 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 ZNF295-AS1Q8N0V1 137 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 OR52L2PQ8NGH6 319 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 SAMD10Q9BYL1 202 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 TP53TG3Q9ULZ0 132 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 SH2D1BO14796 132 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 RPL15P61313 204 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 ARG2P78540 354 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 LDLRAD2Q5SZI1 272 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 HAPLN4Q86UW8 402 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 OR1L1Q8NH94 360 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 ORAOV1Q8WV07 137 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 ABHD14BQ96IU4 210 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 P2RX4Q99571 388 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 BOKQ9UMX3 212 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 LAMTOR5O43504 91 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 AGFG2O95081 481 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 GABRA2P47869 451 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 HNRNPA3P51991 378 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 LINC00310P59036 64 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 TPPP2P59282 170 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms