RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 VCX2Q9H322 139 aa11.52□□□□□ -0.57
HIPK3-202ENST00000379016 CYB5R3P00387 301 aaPredicted RBP11.51□□□□□ -0.57
HIPK3-202ENST00000379016 ASIPP42127 132 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 SPAARA0A1B0GVQ0 90 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 RSPO2Q6UXX9 243 aaPredicted RBP11.51□□□□□ -0.57
HIPK3-202ENST00000379016 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 LRTM2Q8N967 370 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 MRPL24Q96A35 216 aaKnown RBP11.51□□□□□ -0.57
HIPK3-202ENST00000379016 PDLIM4P50479 330 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 ST6GAL2Q96JF0 529 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 TRAV24A0A0B4J272 114 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 GRIFINA4D1Z8 144 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 PCNX2A6NKB5 2137 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 ZNF600Q6ZNG1 722 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 NEUROG1Q92886 237 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 DLL1O00548 723 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 CEACAM5P06731 702 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
HIPK3-202ENST00000379016 PGFP49763 221 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 TMPRSS3P57727 454 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 CTAG1AP78358 180 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 TNFRSF14Q92956 283 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 NDUFS8O00217 210 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
HIPK3-202ENST00000379016 C5orf47Q569G3 176 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 ZNF430Q9H8G1 570 aaPredicted RBP11.5□□□□□ -0.57
HIPK3-202ENST00000379016 CBLN4Q9NTU7 201 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 MTFP1Q9UDX5 166 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 RPL8P62917 257 aaKnown RBP11.5□□□□□ -0.57
HIPK3-202ENST00000379016 C1orf185Q5T7R7 199 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 DEFB104AQ8WTQ1 72 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 OPN3Q9H1Y3 402 aaPredicted RBP11.5□□□□□ -0.57
HIPK3-202ENST00000379016 KCNK7Q9Y2U2 307 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 C1orf174Q8IYL3 243 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 CHCHD5Q9BSY4 110 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 ASB10Q8WXI3 467 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 RPP25Q9BUL9 199 aaKnown RBP11.5□□□□□ -0.57
HIPK3-202ENST00000379016 SDF2L1Q9HCN8 221 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 ADGRB2O60241 1585 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 DCAF10Q5QP82 559 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
HIPK3-202ENST00000379016 IGKV6D-21A0A0A0MT36 114 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 TRA2AQ13595 282 aaKnown RBP eCLIP11.49□□□□□ -0.57
HIPK3-202ENST00000379016 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 ZFPL1O95159 310 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 OR51M1Q9H341 326 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
HIPK3-202ENST00000379016 FGF20Q9NP95 211 aaPredicted RBP11.49□□□□□ -0.57
HIPK3-202ENST00000379016 LTN1O94822 1766 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 CD7P09564 240 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 ESDP10768 282 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 SRD5A1P18405 259 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 LDLRAD2Q5SZI1 272 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 SLC17A5Q9NRA2 495 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 SELENOKQ9Y6D0 94 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 PPIAL4CA0A0B4J2A2 164 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 LNP1A1A4G5 178 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 PPIAL4GP0DN37 164 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 CRYBB3P26998 211 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
HIPK3-202ENST00000379016 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 KIDINS220Q9ULH0 1771 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 GLRXP35754 106 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 FIZ1Q96SL8 496 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 QTRT1Q9BXR0 403 aaKnown RBP11.49□□□□□ -0.57
HIPK3-202ENST00000379016 CALYQ9NYX4 217 aa11.49□□□□□ -0.57
HIPK3-202ENST00000379016 H3BMM0 161 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 FUNDC1Q8IVP5 155 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 UBE2WQ96B02 151 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 GGTLC1Q9BX51 225 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 SPINT1O43278 529 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 PAX4O43316 350 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 RUNX1Q01196 453 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 HPRT1P00492 218 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
HIPK3-202ENST00000379016 MBD1Q9UIS9 605 aaPredicted RBP11.48□□□□□ -0.57
HIPK3-202ENST00000379016 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
HIPK3-202ENST00000379016 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 TRAV30A0A087WSZ9 112 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
HIPK3-202ENST00000379016 ICAM4Q14773 271 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 SERGEFQ9UGK8 458 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 SDK2Q58EX2 2172 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 NIT1Q86X76 327 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 TP53I13Q8NBR0 393 aaPredicted RBP11.48□□□□□ -0.57
HIPK3-202ENST00000379016 TMEM45BQ96B21 275 aa11.48□□□□□ -0.57
HIPK3-202ENST00000379016 PRB1P04280 392 aa11.47□□□□□ -0.57
HIPK3-202ENST00000379016 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
HIPK3-202ENST00000379016 IL9P15248 144 aa11.47□□□□□ -0.57
HIPK3-202ENST00000379016 TRAF4Q9BUZ4 470 aaPredicted RBP11.47□□□□□ -0.57
HIPK3-202ENST00000379016 GFRA3O60609 400 aa11.47□□□□□ -0.57
HIPK3-202ENST00000379016 NCR2O95944 276 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms