RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 RPUSD1Q9UJJ7 312 aaKnown RBP12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 DVL1O14640 695 aa12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 MEF2CQ06413 473 aaPredicted RBP12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 TMEM200BQ69YZ2 307 aa12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 OR8G2PQ6IF36 304 aa12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 DTD1Q8TEA8 209 aa12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 GNPNAT1Q96EK6 184 aaPredicted RBP12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 FAM96BQ9Y3D0 163 aa12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
RAB3IP-203ENST00000378809 A0A1B0GV50 99 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 LYNX1G3V0Z9 82 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 ZG16O60844 167 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 IFNA17P01571 189 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 OR9G9P0C7N8 305 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 LYNX1P0DP58 116 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 KIR2DS2P43631 304 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 TMEM30BQ3MIR4 351 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 OR4S2Q8NH73 311 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 LINC00574Q9H8X3 128 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
RAB3IP-203ENST00000378809 TMEM218A2RU14 115 aa12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 RBFOX2O43251 390 aaKnown RBP eCLIP12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 FCN3O75636 299 aa12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 NQO2P16083 231 aa12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 THBS3P49746 956 aa12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 SCGB1C1Q8TD33 95 aa12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 QTRT1Q9BXR0 403 aaKnown RBP12.15□□□□□ -0.47
RAB3IP-203ENST00000378809 NBASA2RRP1 2371 aa12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 DAOP14920 347 aa12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 SLC25A48Q6ZT89 311 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 GAB2Q9UQC2 676 aa12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 FBXO7Q9Y3I1 522 aa12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 USF3Q68DE3 2245 aa12.14□□□□□ -0.47
RAB3IP-203ENST00000378809 DIDO1Q9BTC0 2240 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 UMAD1C9J7I0 102 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 F8W036 122 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 TRIM77I1YAP6 450 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 DDB2Q92466 427 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 CIB3Q96Q77 187 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 COL6A6A6NMZ7 2263 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 TNFRSF13BO14836 293 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 NDUFA2O43678 99 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 TFF3Q07654 80 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 ZNF383Q8NA42 475 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 ADTRPQ96IZ2 230 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 UQCC1Q9NVA1 299 aa12.13□□□□□ -0.47
RAB3IP-203ENST00000378809 UBE2L5PA0A1B0GUS4 154 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 RNASEK-C17orf49H0YIS7 233 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 COL8A2P25067 703 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 TMEM14EPQ6UXP3 125 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 SUN5Q8TC36 379 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 KAAG1Q9UBP8 84 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 TANC2Q9HCD6 1990 aa12.12□□□□□ -0.47
RAB3IP-203ENST00000378809 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 EIF5A2Q9GZV4 153 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 TRAV3A0A0B4J244 114 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 GPR37O15354 613 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 ADCYAP1P18509 176 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 SNCAP37840 140 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 UQCRFS1P47985 274 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 TAGLNQ01995 201 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 HNF4GQ14541 408 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 RHOVQ96L33 236 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 TMEM204Q9BSN7 226 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 ITPR1Q14643 2758 aa12.11□□□□□ -0.47
RAB3IP-203ENST00000378809 DSCAML1Q8TD84 2053 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 FAM90A9PA6NNJ1 464 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 PPOXP50336 477 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 DVL1P1P54792 670 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 RTL8BQ17RB0 113 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms