RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 Q6ZT83 130 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 OR1P1Q8NH06 330 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 ESPL1Q14674 2120 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 LOC390937A0A1W2PQ73 354 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 NPY1RP25929 384 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 LYZP61626 148 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 P2RX4Q99571 388 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 ABHD14AQ9BUJ0 271 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 UQCR10Q9UDW1 63 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 IL19Q9UHD0 177 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 ZDHHC8Q9ULC8 765 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 K7N7A8 449 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 GOSR1O95249 250 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 SSMEM1Q8WWF3 244 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 NPBWR2P48146 333 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 REG1BP48304 166 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 RPL30P62888 115 aaKnown RBP12.87□□□□□ -0.35
NPHP4-201ENST00000378156 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
NPHP4-201ENST00000378156 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 OR52M1Q8NGK5 317 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 J3QR06 171 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 OR4A47Q6IF82 309 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 SAXO1Q8IYX7 474 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 TMEM45BQ96B21 275 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 ZNF714Q96N38 554 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 HSPB9Q9BQS6 159 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 FREM3P0C091 2139 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 THSD7BQ9C0I4 1608 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 NAT2P11245 290 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 IGFBP3P17936 291 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-201ENST00000378156 LOC102723996A0A087X1L8 192 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 GNG7O60262 68 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-201ENST00000378156 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 HPRT1P00492 218 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 MMDQ15546 238 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 FADS6Q8N9I5 356 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
NPHP4-201ENST00000378156 J3QW42 95 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 CFHR1Q03591 330 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 ZFP36L1Q07352 338 aaKnown RBP12.85□□□□□ -0.35
NPHP4-201ENST00000378156 POC1AQ8NBT0 407 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 OR1B1Q8NGR6 318 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-201ENST00000378156 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 TNFSF10P50591 281 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 GAMTQ14353 236 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 AP5S1Q9NUS5 200 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 POLEQ07864 2286 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 MPDU1O75352 247 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 MEF2BQ02080 365 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-201ENST00000378156 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
NPHP4-201ENST00000378156 RALGAPA1Q6GYQ0 2036 aa12.85□□□□□ -0.35
NPHP4-201ENST00000378156 ODAMA1E959 279 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 NPIPB7O75200 414 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 ZNF708P17019 499 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 GCSAMQ8N6F7 178 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 RSG1Q9BU20 258 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 TRAV14DV4A0A0A6YYC5 116 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 A0A0G2JMM0 328 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 A0A1W2PPB8 328 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 A0A1W2PRS3 328 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 KIR3DP1A8MWS1 328 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 H0Y980 276 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 PCGF1Q9BSM1 259 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 NLRC5Q86WI3 1866 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 SH2D7A6NKC9 451 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-201ENST00000378156 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
NPHP4-201ENST00000378156 KLK2P20151 261 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 RHOVQ96L33 236 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 METTL1Q9UBP6 276 aaKnown RBP12.84□□□□□ -0.35
NPHP4-201ENST00000378156 C9orf172C9J069 976 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPHP4-201ENST00000378156 FHITP49789 147 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 SLC25A53Q5H9E4 307 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 MYOZ3Q8TDC0 251 aa12.84□□□□□ -0.35
NPHP4-201ENST00000378156 ZNF837Q96EG3 531 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-201ENST00000378156 MDC1Q14676 2089 aaKnown RBP12.84□□□□□ -0.35
NPHP4-201ENST00000378156 HLA-DQA1P01909 254 aa12.83□□□□□ -0.35
NPHP4-201ENST00000378156 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.35
NPHP4-201ENST00000378156 C10orf113Q5VZT2 155 aa12.83□□□□□ -0.35
NPHP4-201ENST00000378156 ASPHD2Q6ICH7 369 aa12.83□□□□□ -0.35
NPHP4-201ENST00000378156 KLF7O75840 302 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-201ENST00000378156 MFAP2P55001 183 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 DLX1P56177 255 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 ERVFRD-1P60508 538 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 A8MWL6 223 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 SLC35E4Q6ICL7 350 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms