RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 OR2D2Q9H210 308 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 WIPI2Q9Y4P8 454 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 GTF3C1Q12789 2109 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 LRRC30A6NM36 301 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 PMS2P5A8MQ11 134 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 C2CD4DB7Z1M9 353 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 ARL14EPLP0DKL9 152 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 TIMP3P35625 211 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 YPEL3P61236 119 aaPredicted RBP13.33□□□□□ -0.28
CKAP4-201ENST00000378026 SUMO1P63165 101 aaKnown RBP13.33□□□□□ -0.28
CKAP4-201ENST00000378026 GUSBP11Q6P575 273 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 LRFN3Q9BTN0 628 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 COL6A3P12111 3177 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 ZNF503-AS2A6NEH8 195 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 C17orf112F2Z3M2 114 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 OR5G3P0C626 314 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 CD99P14209 185 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 ATP6V1FQ16864 119 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 VASH2Q86V25 355 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 OCIAD1Q9NX40 245 aa13.33□□□□□ -0.28
CKAP4-201ENST00000378026 GJE1A6NN92 205 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.32□□□□□ -0.28
CKAP4-201ENST00000378026 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 AMTP48728 403 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 GGNQ86UU5 652 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 SAXO1Q8IYX7 474 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
CKAP4-201ENST00000378026 TBL2Q9Y4P3 447 aaKnown RBP13.32□□□□□ -0.28
CKAP4-201ENST00000378026 MED12LQ86YW9 2145 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 RPP30P78346 268 aaKnown RBP13.32□□□□□ -0.28
CKAP4-201ENST00000378026 STARD4Q96DR4 205 aa13.32□□□□□ -0.28
CKAP4-201ENST00000378026 QTRT1Q9BXR0 403 aaKnown RBP13.32□□□□□ -0.28
CKAP4-201ENST00000378026 PRRC2CQ9Y520 2896 aaKnown RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 C17orf98A8MV24 154 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 CCL25O15444 150 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 NDUFB8O95169 186 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 CEBPDP49716 269 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 HOXA4Q00056 320 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 RPS19BP1Q86WX3 136 aaKnown RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 MRPL33O75394 65 aaKnown RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 EN2P19622 333 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 HINT1P49773 126 aaPredicted RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 CCL7P80098 99 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 GNB4Q9HAV0 340 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 A0A1W2PQM1 296 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 B3GALT5-AS1P59052 145 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 SELENOTP62341 195 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 PSG7Q13046 419 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 TIPARPQ7Z3E1 657 aaKnown RBP13.31□□□□□ -0.28
CKAP4-201ENST00000378026 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 ZNF586Q9NXT0 402 aa13.31□□□□□ -0.28
CKAP4-201ENST00000378026 ANKRD30BLA7E2S9 258 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 OR2H2O95918 312 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 NAT8BQ9UHF3 227 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 K7EN84 100 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 RRHO14718 337 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 TCL1AP56279 114 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 HTD2P86397 168 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 RNF151Q2KHN1 245 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 ETFRF1Q6IPR1 90 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 H2BFWTQ7Z2G1 175 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 MRPL52Q86TS9 123 aaKnown RBP13.3□□□□□ -0.28
CKAP4-201ENST00000378026 OR52L2PQ8NGH6 319 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 IFI44Q8TCB0 444 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 PLPPR2Q96GM1 343 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 ZNF703Q9H7S9 590 aaPredicted RBP13.3□□□□□ -0.28
CKAP4-201ENST00000378026 NRN1Q9NPD7 142 aa13.3□□□□□ -0.28
CKAP4-201ENST00000378026 CD1BP29016 333 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 MAJINQ3KP22 176 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 MIC13Q5XKP0 118 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 UNQ5815/PRO19632Q6UWF5 114 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 SSMEM1Q8WWF3 244 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 RCHY1Q96PM5 261 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 IGHV5-10-1A0A0J9YXX1 117 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 GPX1P07203 203 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 NTF3P20783 257 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 RPL31P62899 125 aaKnown RBP13.29□□□□□ -0.28
CKAP4-201ENST00000378026 ERASQ7Z444 233 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 UHRF2Q96PU4 802 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 IL36BQ9NZH7 164 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 LAMTOR2Q9Y2Q5 125 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 WDFY4Q6ZS81 3184 aa13.29□□□□□ -0.28
CKAP4-201ENST00000378026 IGHV1-45A0A0A0MS14 117 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 ANKRD39Q53RE8 183 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 ST6GALNAC3Q8NDV1 305 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 C5orf30Q96GV9 206 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 YTHDF2Q9Y5A9 579 aaKnown RBP13.28□□□□□ -0.28
CKAP4-201ENST00000378026 KIAA1549Q9HCM3 1950 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms