RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ARID1BQ8NFD5 2236 aaPredicted RBP7.47□□□□□ -1.21
PCDH9-202ENST00000377865 TRAV17A0A0B4J275 112 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 A0A1W2PPE3 182 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 PRDX2P32119 198 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 ARL16Q0P5N6 197 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 CACNA1CQ13936 2221 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 K7ESF4 209 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 DLL1O00548 723 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 CELA2AP08217 269 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 SMOC1Q9H4F8 434 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF319Q9P2F9 582 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 AMMECR1Q9Y4X0 333 aaPredicted RBP7.47□□□□□ -1.21
PCDH9-202ENST00000377865 A8MWL6 223 aa7.46□□□□□ -1.21
PCDH9-202ENST00000377865 PTGDSP41222 190 aa7.46□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF146Q15072 292 aa7.46□□□□□ -1.21
PCDH9-202ENST00000377865 MRPS18CQ9Y3D5 142 aaKnown RBP7.46□□□□□ -1.21
PCDH9-202ENST00000377865 ANAPC1Q9H1A4 1944 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 IFITM10A6NMD0 228 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 NEURL1O76050 574 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 PPOXP50336 477 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 UCP2P55851 309 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 GBGT1Q8N5D6 347 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 PNRC2Q9NPJ4 139 aaKnown RBP7.46□□□□□ -1.22
PCDH9-202ENST00000377865 RNF7Q9UBF6 113 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 PDE4DIPQ5VU43 2346 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 CCL4P13236 92 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 BTF3P20290 206 aaKnown RBP7.46□□□□□ -1.22
PCDH9-202ENST00000377865 HINT1P49773 126 aaPredicted RBP7.46□□□□□ -1.22
PCDH9-202ENST00000377865 MFAP2P55001 183 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 RTP5Q14D33 572 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 ACSF3Q4G176 576 aaPredicted RBP7.46□□□□□ -1.22
PCDH9-202ENST00000377865 SLC25A45Q8N413 288 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 OR2T6Q8NHC8 308 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 GRAMD2BQ96HH9 432 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 GRIFINA4D1Z8 144 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 RBP4P02753 201 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 CRYGSP22914 178 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 SRIP30626 198 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 SELENOTP62341 195 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 HES1Q14469 280 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.22
PCDH9-202ENST00000377865 TMEM140Q9NV12 185 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
PCDH9-202ENST00000377865 AMBPP02760 352 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ORM2P19652 201 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 PLAURQ03405 335 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 TFF3Q07654 80 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 Q6ZS49 121 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 FAM216AQ8WUB2 273 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 COL8A1P27658 744 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF83P51522 516 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 HSPE1P61604 102 aaKnown RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ACTL10Q5JWF8 245 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 OR4A47Q6IF82 309 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 CALHM1Q8IU99 346 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 TIMD4Q96H15 378 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ODAMA1E959 279 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ACP1P24666 158 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 PRRX1P54821 245 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 NUTF2P61970 127 aaKnown RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 IZUMO4Q1ZYL8 232 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 IGHV2-70P01814 119 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 IGHV2-5P01817 119 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 C8orf88P0DMB2 117 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF324BQ6AW86 544 aaPredicted RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ASCL5Q7RTU5 278 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 FLYWCH2Q96CP2 140 aaKnown RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 HS3ST3B1Q9Y662 390 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 IL6RP08887 468 aaPredicted RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 CBLN1P23435 193 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 GPX4P36969 197 aaPredicted RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 RND2P52198 227 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 NUBP1P53384 320 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 ARSJQ5FYB0 599 aaPredicted RBP7.45□□□□□ -1.22
PCDH9-202ENST00000377865 MOGAT3Q86VF5 341 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 STPG3Q8N7X2 389 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 DNASE2BQ8WZ79 361 aa7.45□□□□□ -1.22
PCDH9-202ENST00000377865 IGKV1D-13A0A0B4J2D9 117 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 FAM90A9PA6NNJ1 464 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 IGKV1-13P0DP09 117 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 SPINK2P20155 84 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 LGALS4P56470 323 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 ERVFRD-1P60508 538 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 MOB3BQ86TA1 216 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 C14orf144Q96I85 54 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 HARBI1Q96MB7 349 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 IFNL4K9M1U5 179 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 ZIC3O60481 467 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 PCP4P48539 62 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 LYZP61626 148 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 C3AR1Q16581 482 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 CENPWQ5EE01 88 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 NMSQ5H8A3 153 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 CYB5R2Q6BCY4 276 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 SLC25A34Q6PIV7 304 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF703Q9H7S9 590 aaPredicted RBP7.44□□□□□ -1.22
PCDH9-202ENST00000377865 DPRXA6NFQ7 191 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms