RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SNRNP40Q96DI7 357 aaKnown RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 C5orf30Q96GV9 206 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 IZUMO1RA6ND01 250 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 COL8A1P27658 744 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 EIF3GO75821 320 aaKnown RBP eCLIP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 IBA57Q5T440 356 aaKnown RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 IGHV3-13P01766 116 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 OR10J6PQ8NGY7 276 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 RARRES2Q99969 163 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 PGPEP1LA6NFU8 196 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF324BQ6AW86 544 aaPredicted RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 TPSD1Q9BZJ3 242 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 ERVK11-1P61568 191 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 OR51B2Q9Y5P1 312 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 F2RL2O00254 374 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 MFAP4P55083 255 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 GUCA2AQ02747 115 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 NEU4Q8WWR8 484 aaPredicted RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM230Q96A57 120 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BKO60814 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BJP06899 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BOP23527 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BBP33778 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BDP58876 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BCP62807 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST2H2BEQ16778 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BHQ93079 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BNQ99877 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BMQ99879 126 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 MYH8P13535 1937 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 FAM221AA4D161 298 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 PPOXP50336 477 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 CACNG7P62955 275 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 PMS2CLQ68D20 193 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 FAM222BQ8WU58 562 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM92Q6UXU6 159 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 RPEQ96AT9 228 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 MYH9P35579 1960 aaKnown RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 A0A1B0GV72 72 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 VPS25Q9BRG1 176 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 GRPP07492 148 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 PLNP26678 52 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 SPXQ9BT56 116 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF880Q6PDB4 577 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 TMEFF1Q8IYR6 380 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 SEC16AO15027 2179 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 LAMB2P55268 1798 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 PRSS12P56730 875 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 F8W1H4 67 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 TBR1Q16650 682 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 NUP37Q8NFH4 326 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 DYNLRB1Q9NP97 96 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 CLEC9AQ6UXN8 241 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM116Q8NCL8 245 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 PAXXQ9BUH6 204 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 A0A0J9YW62 118 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 KIR2DL4Q99706 377 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 ABHD14AQ9BUJ0 271 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 SP9P0CG40 484 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 INSL4Q14641 139 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 VWC2Q2TAL6 325 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 PARLQ9H300 379 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 CCL28Q9NRJ3 127 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 THSD7AQ9UPZ6 1657 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 Q8TCH9 128 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 ATRXP46100 2492 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 MESP1Q9BRJ9 268 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 OVOL2Q9BRP0 275 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 CDAP32320 146 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF525Q8N782 197 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 CNEP1R1Q8N9A8 125 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H2BLQ99880 126 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 DLL3Q9NYJ7 618 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 C11orf52Q96A22 123 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 HIGD1AQ9Y241 93 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 IGHV2OR16-5A0A0B4J2B6 119 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 NTN3O00634 580 aaPredicted RBP4.18□□□□□ -1.74
PCDH9-201ENST00000377861 GPX1P07203 203 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 QSER1Q2KHR3 1735 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 RUNX1Q01196 453 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 LYPD8Q6UX82 237 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 TRBV6-1A0A0K0K1D8 114 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 M0R2Z0 102 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 CBLN4Q9NTU7 201 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 LOXL2Q9Y4K0 774 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 OR5I1Q13606 314 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 FBLN7Q53RD9 439 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 MINOS1Q5TGZ0 78 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 LINC00311Q8N616 119 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 SPSB2Q99619 263 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 MINOS1-NBL1R4GNA1 71 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 FABP5P3A8MUU1 101 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 TWIST1Q15672 202 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 SP6Q3SY56 376 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 BHLHA15Q7RTS1 189 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms