RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 SURF2Q15527 256 aaPredicted RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 GUCA2BQ16661 112 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 HAGHQ16775 308 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 MBNL2Q5VZF2 373 aaKnown RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 LYPD2Q6UXB3 125 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 OR1B1Q8NGR6 318 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM103A1Q9BTL3 118 aaKnown RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 VSIG4Q9Y279 399 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 J3KRW8 73 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 MFNGO00587 321 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 SOD3P08294 240 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 S100PP25815 95 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 RHOBP62745 196 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 ARL16Q0P5N6 197 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 FXYD3Q14802 87 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 HIST2H2BCQ6DN03 193 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 FGFRL1Q8N441 504 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 OR4C13Q8NGP0 309 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 FRZBQ92765 325 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 RBM14Q96PK6 669 aaKnown RBP7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 RAB18Q9NP72 206 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 C19orf12Q9NSK7 152 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 TIMM9Q9Y5J7 89 aa7.09□□□□□ -1.28
CRNKL1-202ENST00000377340 DSCAMO60469 2012 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 K7EQM0 130 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 PAX6P26367 422 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 UBE2G1P62253 170 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 UBA52P62987 128 aaKnown RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 ADORA2A-AS1P86434 159 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 MMD2Q8IY49 270 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 OR2T10Q8NGZ9 312 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 HS3ST6Q96QI5 342 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 PRORYQ9H606 182 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 DENND4AQ7Z401 1863 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 PGLYRP1O75594 196 aaPredicted RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 EXOSC2Q13868 293 aaKnown RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 KLF9Q13886 244 aaPredicted RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 ACOT6Q3I5F7 207 aaPredicted RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 DHRS7BQ6IAN0 325 aaPredicted RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 FAM166AQ6J272 317 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 RCC2Q9P258 522 aaKnown RBP7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 LINC00312Q9Y6C7 94 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 IGHV3OR16-8A0A075B7F1 116 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 TRAV24A0A0B4J272 114 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 CTDSPLO15194 276 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 DKK1O94907 266 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 S1PR2O95136 353 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 HBE1P02100 147 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 PF4P02776 101 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 PSMB3P49720 205 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 DLX1P56177 255 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 C5orf24Q7Z6I8 188 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 ZNF645Q8N7E2 425 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 RNF141Q8WVD5 230 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 LURAP1Q96LR2 239 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 MED9Q9NWA0 146 aa7.08□□□□□ -1.28
CRNKL1-202ENST00000377340 SIGLEC5O15389 551 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 GSTZ1O43708 216 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 MPC2O95563 127 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 TRAPPC2P0DI81 140 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 TRAPPC2BP0DI82 140 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ARL3P36405 182 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 EFNB1P98172 346 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 RHEBQ15382 184 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 PRR27Q6MZM9 219 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ZNF818PQ6ZRF7 136 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 NR2C2APQ86WQ0 139 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 SSX3Q99909 188 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 IFT22Q9H7X7 185 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 TMEM140Q9NV12 185 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 EML6Q6ZMW3 1958 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 SH2D7A6NKC9 451 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 MARCH11A6NNE9 402 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ZNF250P15622 560 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ZNF529Q6P280 563 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 NUP37Q8NFH4 326 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ACTR3CQ9C0K3 210 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ACAA1P09110 424 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 DSCR9P59020 149 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 SIGIRRQ6IA17 410 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 C11orf87Q6NUJ2 197 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ZNF600Q6ZNG1 722 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 COMMD7Q86VX2 200 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 DUSP18Q8NEJ0 188 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 Q8WTZ3 238 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 GRAMD2BQ96HH9 432 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 MRPL20Q9BYC9 149 aaKnown RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 IGHV3-49A0A0A0MS15 119 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 KCNAB3O43448 404 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 CT45A10P0DMU9 189 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 MEF2CQ06413 473 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 PEA15Q15121 130 aa7.07□□□□□ -1.28
CRNKL1-202ENST00000377340 FFAR4Q5NUL3 377 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms