RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 DDTP30046 118 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 STARD6P59095 220 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 KCNE5Q9UJ90 142 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 ZDHHC8Q9ULC8 765 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 TSPAN2O60636 221 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 HLA-DRB1P01911 266 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 LINC00869P0C866 280 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 CX3CL1P78423 397 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 PLA2G2FQ9BZM2 168 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 NPVFQ9HCQ7 196 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 CYB5R3P00387 301 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-204ENST00000376634 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-204ENST00000376634 NXPH1P58417 271 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 SLC25A53Q5H9E4 307 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 WIPI2Q9Y4P8 454 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 QTRT1Q9BXR0 403 aaKnown RBP10.83□□□□□ -0.68
VPS13A-204ENST00000376634 TRAV39A0A0B4J263 110 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 hCG_38984A0A1B0GV85 526 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 IFNL4K9M1U5 179 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 FCGR3AP08637 254 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 MC5RP33032 325 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 ATP5G2Q06055 141 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 DMKNQ6E0U4 476 aaPredicted RBP10.83□□□□□ -0.68
VPS13A-204ENST00000376634 UCN2Q96RP3 112 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 TMPRSS3P57727 454 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 C1orf185Q5T7R7 199 aa10.83□□□□□ -0.68
VPS13A-204ENST00000376634 A0A0U1RQV5 110 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 A0A1B0GV90 55 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 TMEM45BQ96B21 275 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 PRSS27Q9BQR3 290 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 C7orf71A4D174 169 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 OGG1O15527 345 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 RCC1P18754 421 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 C9orf50Q5SZB4 431 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 MRPL24Q96A35 216 aaKnown RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 COX14Q96I36 57 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 CCL3P10147 92 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 OR1P1Q8NH06 330 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 ZNF815PA8K554 130 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 PNLIPP16233 465 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 GPR6P46095 362 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 MBNL2Q5VZF2 373 aaKnown RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 PF4P02776 101 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 TRGC1P0CF51 173 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 ZNF430Q9H8G1 570 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 CHODLQ9H9P2 273 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 FGF5P12034 268 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 AMER3Q8N944 861 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 TUBA4BQ9H853 241 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 SFRP2Q96HF1 295 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 TXNDC17Q9BRA2 123 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 KLK15Q9H2R5 256 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 VCX2Q9H322 139 aa10.82□□□□□ -0.68
VPS13A-204ENST00000376634 RPL27AP46776 148 aaKnown RBP10.82□□□□□ -0.68
VPS13A-204ENST00000376634 C17orf51A8MQB3 221 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 HOXD4P09016 255 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-204ENST00000376634 HCP5Q6MZN7 132 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 DSCAML1Q8TD84 2053 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PPIAL4EA0A075B759 164 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PPIAL4DF5H284 164 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 NDUFB4O95168 129 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PPIAL4FP0DN26 164 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 ZFP36L2P47974 494 aaKnown RBP10.81□□□□□ -0.68
VPS13A-204ENST00000376634 CCL8P80075 99 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 OR4D5Q8NGN0 318 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 ST6GAL2Q96JF0 529 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PPIAL4AQ9Y536 164 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 HAX1O00165 279 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 P2RY6Q15077 328 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 ZNF658BQ4V348 819 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-204ENST00000376634 HMGCLL1Q8TB92 370 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 R3HDMLQ9H3Y0 253 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PEF1Q9UBV8 284 aaKnown RBP10.81□□□□□ -0.68
VPS13A-204ENST00000376634 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 CXorf66Q5JRM2 361 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-204ENST00000376634 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PCP4P48539 62 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 PSMB11A5LHX3 300 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
VPS13A-204ENST00000376634 C1QTNF9BB2RNN3 333 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
VPS13A-204ENST00000376634 CEACAM21Q3KPI0 293 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 AGRNO00468 2067 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
VPS13A-204ENST00000376634 OR13C6PQ8NH95 151 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 TRBV9A0A0B4J1U6 114 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 ZNF98A6NK75 572 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 ATP6V0CP27449 155 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 RBKSQ9H477 322 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 TMEM262E9PQX1 116 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 SOD3P08294 240 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 OTX1P32242 354 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-204ENST00000376634 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 EDIL3O43854 480 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 GDF9O60383 454 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 DCAF10Q5QP82 559 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 MSRB3Q8IXL7 192 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms