RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 FAM90A7PA6NKC0 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A22PA8MWA6 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A23PA8MXZ1 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 GNG7O60262 68 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 WDR1O75083 606 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 NGFP01138 241 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A13PP0C7W8 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A24PP0C7X0 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 C1QTNF9P0C862 333 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 COL8A2P25067 703 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 CCKARP32238 428 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 MPLP40238 635 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 SPINK9Q5DT21 86 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 KIR2DL5AQ8N109 375 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 CISD2Q8N5K1 135 aaKnown RBP9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 ACOT6Q3I5F7 207 aaPredicted RBP9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 ACSF3Q4G176 576 aaPredicted RBP9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 C19orf35Q6ZS72 473 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 OR1L1Q8NH94 360 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 PSMF1Q92530 271 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 LSM10Q969L4 123 aaKnown RBP9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 ALKBH7Q9BT30 221 aaPredicted RBP9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF576Q9H609 170 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF391Q9UJN7 358 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 DOCK7Q96N67 2140 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 IGHV5-10-1A0A0J9YXX1 117 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 C20orf202A1L168 122 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 C5orf49A4QMS7 147 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 RAMP3O60896 148 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 TYMSP04818 313 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 IRF2P14316 349 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 CCL7P80098 99 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 GCSAMLQ5JQS6 135 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FFAR4Q5NUL3 377 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 HLA-CQ95604 372 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 MS4A10Q96PG2 267 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 M0QXV9 152 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 GAGE1Q13065 139 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 CEACAM21Q3KPI0 293 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 MRPL14Q6P1L8 145 aaKnown RBP9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 TMEM14EPQ6UXP3 125 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 FGFRL1Q8N441 504 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 TMEM9BQ9NQ34 198 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 MANBALQ9NQG1 85 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 C19orf25Q9UFG5 118 aaPredicted RBP9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 HELTA6NFD8 242 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 HPRT1P00492 218 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 S100GP29377 79 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 ATP5G3P48201 142 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 TFPI2P48307 235 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 MKXQ8IYA7 352 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 C11orf42Q8N5U0 333 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 OR10D3Q8NH80 312 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 TMEM204Q9BSN7 226 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 DLL3Q9NYJ7 618 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 IGHV1-45A0A0A0MS14 117 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 IGHV3-64DA0A0J9YX35 117 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 UMODP07911 640 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 ADMP35318 185 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 GNB1P62873 340 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 ATP6V1FQ16864 119 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 WIPI1Q5MNZ9 446 aaPredicted RBP9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 DCAF10Q5QP82 559 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 COLCA1Q6ZS62 124 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 SMRP1Q8NCR6 262 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 FSCN3Q9NQT6 498 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 TP53TG3Q9ULZ0 132 aa9.68□□□□□ -0.86
TM9SF2-201ENST00000376387 MED12LQ86YW9 2145 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 C11orf94C9JXX5 98 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 SELEP16581 610 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 CD82P27701 267 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 OR3A1P47881 315 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 PET117Q6UWS5 81 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 Q6ZWC4 215 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM222BQ8WU58 562 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 NEIL1Q96FI4 390 aaPredicted RBP9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 PRDM14Q9GZV8 571 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 SH2D2AQ9NP31 389 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 PXMP4Q9Y6I8 212 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 MLNRO43193 412 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 RBFOX2O43251 390 aaKnown RBP eCLIP9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 KRASP01116 189 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 G6PCP35575 357 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 CDKN1AP38936 164 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 SSR4P51571 173 aa9.67□□□□□ -0.86
TM9SF2-201ENST00000376387 LINC00310P59036 64 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms