RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 GATCO43716 136 aaKnown RBP12.13□□□□□ -0.47
MSH5-201ENST00000375703 GZMHP20718 246 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 FOXF2Q12947 444 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 RTP5Q14D33 572 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 ACOT6Q3I5F7 207 aaPredicted RBP12.13□□□□□ -0.47
MSH5-201ENST00000375703 PLA2G2CQ5R387 149 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
MSH5-201ENST00000375703 HIST1H2BLQ99880 126 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 DCTN5Q9BTE1 182 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 QTRT1Q9BXR0 403 aaKnown RBP12.13□□□□□ -0.47
MSH5-201ENST00000375703 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 PPP5D1E7EU14 171 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 WISP2O76076 250 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 DEFA4P12838 97 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 R3HDM4Q96D70 268 aa12.13□□□□□ -0.47
MSH5-201ENST00000375703 NEIL1Q96FI4 390 aaPredicted RBP12.13□□□□□ -0.47
MSH5-201ENST00000375703 CACNA1DQ01668 2161 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 GYPAP02724 150 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 ADH4P08319 380 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 KITLGP21583 273 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 GCH1P30793 250 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 KIR2DL2P43627 348 aaPredicted RBP12.12□□□□□ -0.47
MSH5-201ENST00000375703 CDC34P49427 236 aaPredicted RBP12.12□□□□□ -0.47
MSH5-201ENST00000375703 EDDM3AQ14507 147 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 ZNF718Q3SXZ3 478 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 VWA1Q6PCB0 445 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 ANAPC16Q96DE5 110 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 SMCO3A2RU48 225 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 C15orf62A8K5M9 175 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 CD1BP29016 333 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 TMEM183AQ8IXX5 376 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 CD177Q8N6Q3 437 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 PCGF1Q9BSM1 259 aa12.12□□□□□ -0.47
MSH5-201ENST00000375703 URB1O60287 2271 aaKnown RBP12.11□□□□□ -0.47
MSH5-201ENST00000375703 C11orf94C9JXX5 98 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 C15orf65H3BRN8 121 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 IGHG3P01860 377 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 OR9G9P0C7N8 305 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 CECR9P0C854 216 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 PRDX2P32119 198 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 GPR12P47775 334 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 CCL11P51671 97 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 HTD2P86397 168 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 DEFA6Q01524 100 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 GAMTQ14353 236 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 S100PBPQ96BU1 408 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 ELOVL1Q9BW60 279 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 A0A1W2PPQ1 181 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 FCGR3BO75015 233 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 HRASP01112 189 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 DNLZQ5SXM8 178 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 LOXL4Q96JB6 756 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 OR6C3Q9NZP0 311 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
MSH5-201ENST00000375703 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
MSH5-201ENST00000375703 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 SSX9Q7RTT3 188 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 DOCK11Q5JSL3 2073 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 PROP1O75360 226 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 VENTXO95231 258 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 LY86O95711 162 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 NPPCP23582 126 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 C9orf106Q8NAJ2 232 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 GNG12Q9UBI6 72 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 HPRT1P00492 218 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 IFNA10P01566 189 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 EDDM3BP56851 147 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 GCSAMLQ5JQS6 135 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 Q8N7P7 452 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
MSH5-201ENST00000375703 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 DIRC2Q96SL1 478 aa12.1□□□□□ -0.47
MSH5-201ENST00000375703 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 FAM3BP58499 235 aaPredicted RBP12.09□□□□□ -0.47
MSH5-201ENST00000375703 RPP30P78346 268 aaKnown RBP12.09□□□□□ -0.47
MSH5-201ENST00000375703 MORN2Q502X0 79 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 NKX2-8O15522 239 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 CRYAAP02489 173 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 GPX4P36969 197 aaPredicted RBP12.09□□□□□ -0.47
MSH5-201ENST00000375703 UBE2G2P60604 165 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 SPCS3P61009 180 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms