RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 CNIH2Q6PI25 160 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 UNQ5815/PRO19632Q6UWF5 114 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 PPP1R27Q86WC6 154 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 OR11H1Q8NG94 326 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 ARPC1AQ92747 370 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 AUNIPQ9H7T9 357 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 OR2W1Q9Y3N9 320 aa12.09□□□□□ -0.47
SDHB-201ENST00000375499 MEIS3P1A6NDR6 274 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 SHOXO15266 292 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 TUSC2O75896 110 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 CRYZL1O95825 349 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 HLA-DQB1P01920 261 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 EIF4EBP1Q13541 118 aaPredicted RBP12.08□□□□□ -0.48
SDHB-201ENST00000375499 DCTN2Q13561 401 aaKnown RBP12.08□□□□□ -0.48
SDHB-201ENST00000375499 FXYD3Q14802 87 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 TMEM65Q6PI78 240 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 ZNF645Q8N7E2 425 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 BEST4Q8NFU0 473 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 SNAPC3Q92966 411 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 GPHA2Q96T91 129 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 FUNDC2Q9BWH2 189 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 VCX3AQ9NNX9 186 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 VSIG4Q9Y279 399 aa12.08□□□□□ -0.48
SDHB-201ENST00000375499 A0A0A6YYH2 397 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 A6NJ64 397 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 RUNX1Q01196 453 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 RTL8BQ17RB0 113 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 ACTBL2Q562R1 376 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 DEFB121Q5J5C9 76 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 OR2B11Q5JQS5 317 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 IDO2Q6ZQW0 420 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
SDHB-201ENST00000375499 NAA50Q9GZZ1 169 aaKnown RBP12.07□□□□□ -0.48
SDHB-201ENST00000375499 RBMX2Q9Y388 322 aaKnown RBP12.07□□□□□ -0.48
SDHB-201ENST00000375499 AADACP22760 399 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 LGALS7P47929 136 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 BRWD1-AS2P59051 145 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 VBP1P61758 197 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 DEFA5Q01523 94 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 AKIRIN2Q53H80 203 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 TCTEX1D1Q8N7M0 179 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 OR5M8Q8NGP6 311 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 OR13F1Q8NGS4 319 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 ADTRPQ96IZ2 230 aa12.06□□□□□ -0.48
SDHB-201ENST00000375499 MCRIP2Q9BUT9 160 aaKnown RBP12.06□□□□□ -0.48
SDHB-201ENST00000375499 IGHV4OR15-8A0A075B7B6 117 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 A0A087WW49 117 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 XRCC3O43542 346 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 FCGR3BO75015 233 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 SAA1P0DJI8 122 aaPredicted RBP12.05□□□□□ -0.48
SDHB-201ENST00000375499 APELAP0DMC3 54 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 RRASP10301 218 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 SLURP1P55000 103 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 ZNF616Q08AN1 781 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 TMEM267Q0VDI3 215 aaPredicted RBP12.05□□□□□ -0.48
SDHB-201ENST00000375499 UBE2NLQ5JXB2 153 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 KCTD9Q7L273 389 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 SAMD12Q8N8I0 201 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 OR1N2Q8NGR9 330 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 SLC25A46Q96AG3 418 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 DIABLOQ9NR28 239 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 COL7A1Q02388 2944 aa12.05□□□□□ -0.48
SDHB-201ENST00000375499 TMEM127O75204 238 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 RBMXL2O75526 392 aaKnown RBP12.04□□□□□ -0.48
SDHB-201ENST00000375499 EIF4EP06730 217 aaKnown RBP12.04□□□□□ -0.48
SDHB-201ENST00000375499 LGALS1P09382 135 aaKnown RBP12.04□□□□□ -0.48
SDHB-201ENST00000375499 FCGR2CP31995 323 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 TPPP2P59282 170 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 ARPC4P59998 168 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 UBE2KP61086 200 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 TAGLNQ01995 201 aaKnown RBP12.04□□□□□ -0.48
SDHB-201ENST00000375499 CD69Q07108 199 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 C11orf87Q6NUJ2 197 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 CROCCP3Q8IVE0 287 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 VKORC1L1Q8N0U8 176 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 OR5T1Q8NG75 326 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 B9D2Q9BPU9 175 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 CCL28Q9NRJ3 127 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 TAS2R8Q9NYW2 309 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 SCOCQ9UIL1 159 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 ANAPC10Q9UM13 185 aa12.04□□□□□ -0.48
SDHB-201ENST00000375499 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 CNIH1O95406 144 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 OR8U8P0C7N1 319 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 TAS2R20P59543 309 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 CBX3Q13185 183 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 PRSS8Q16651 343 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 VMA21Q3ZAQ7 101 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 POC5Q8NA72 575 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 SECTM1Q8WVN6 248 aa12.03□□□□□ -0.48
SDHB-201ENST00000375499 DCUN1D4Q92564 292 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms