RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TPPP2P59282 170 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 UBE2NP61088 152 aaKnown RBP6.63□□□□□ -1.35
USP48-203ENST00000374732 DEFB103AP81534 67 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 DPPA3Q6W0C5 159 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 Q6ZRG5 221 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 C15orf40Q8WUR7 153 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 SCGB3A2Q96PL1 93 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 OR2A7Q96R45 310 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 ZNF331Q9NQX6 463 aaPredicted RBP6.63□□□□□ -1.35
USP48-203ENST00000374732 LOC730098B7Z3J9 87 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 M0R1X1 148 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 LINC00271P0C7V0 271 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 GALR1P47211 349 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 SLC35A1P78382 337 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 SLC18B1Q6NT16 456 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TNFAIP8L2Q6P589 184 aaPredicted RBP6.63□□□□□ -1.35
USP48-203ENST00000374732 Q6ZUT4 128 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 HSD11B1LQ7Z5J1 315 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 ZNF417Q8TAU3 575 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 OSR1Q8TAX0 266 aaPredicted RBP6.63□□□□□ -1.35
USP48-203ENST00000374732 RTBDNQ9BSG5 229 aaPredicted RBP6.63□□□□□ -1.35
USP48-203ENST00000374732 Q9UF83 564 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 SNX11Q9Y5W9 270 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 UMAD1C9J7I0 102 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 FAM157AC9JC47 383 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 PMS2P2O95744 297 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 CDK2P24941 298 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 DUTP33316 252 aaKnown RBP6.63□□□□□ -1.35
USP48-203ENST00000374732 BTCP35070 178 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 SPINT3P49223 89 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 COL10A1Q03692 680 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 MOB3BQ86TA1 216 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TMEM219Q86XT9 240 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 KRTCAP2Q8N6L1 136 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 KLHDC1Q8N7A1 406 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 OR5A1Q8NGJ0 315 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 OR5AK2Q8NH90 309 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TMED6Q8WW62 240 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TMEM54Q969K7 222 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TMEM59Q9BXS4 323 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 HES7Q9BYE0 225 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TMEM106BQ9NUM4 274 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 ZNF581Q9P0T4 197 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 ANKRD12Q6UB98 2062 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 hADV38S2A0JD32 116 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 VWC2LB2RUY7 222 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ZNF670-ZNF695F2Z2N8 137 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ZNF593O00488 134 aaPredicted RBP6.62□□□□□ -1.35
USP48-203ENST00000374732 YPEL1O60688 119 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 DANCRP0C864 163 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 CTRLP40313 264 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 CCR2P41597 374 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 LTBQ06643 244 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 OR1C1Q15619 314 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ZNF385BQ569K4 471 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 Q6AWC8 147 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 SEM1Q6ZVN7 128 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 CLDN19Q8N6F1 224 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 TMEM37Q8WXS4 190 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ACY3Q96HD9 319 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 YPEL2Q96QA6 119 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ADOQ96SZ5 270 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 VSIRQ9H7M9 311 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ACER3Q9NUN7 267 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 RLIMQ9NVW2 624 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 MCTS1Q9ULC4 181 aaKnown RBP6.62□□□□□ -1.35
USP48-203ENST00000374732 PLXNA2O75051 1894 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 HTTP42858 3142 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 FAM236AA0A1B0GUQ0 79 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 FAM236BA0A1B0GV22 79 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 KLF7O75840 302 aaPredicted RBP6.62□□□□□ -1.35
USP48-203ENST00000374732 ZFAND5O76080 213 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 VDAC2P45880 294 aaPredicted RBP6.62□□□□□ -1.35
USP48-203ENST00000374732 CDSNQ15517 529 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 ZNF141Q15928 474 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 MST1LQ2TV78 715 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 FAM219BQ5XKK7 198 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 C11orf87Q6NUJ2 197 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 APOOLQ6UXV4 268 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 RNF128Q8TEB7 428 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 RARRES2Q99969 163 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 TMEM100Q9NV29 134 aa6.62□□□□□ -1.35
USP48-203ENST00000374732 SYNGR1O43759 233 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 SFT2D2O95562 160 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 LMO1P25800 156 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 SDC2P34741 201 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 SRYQ05066 204 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 LYRM7Q5U5X0 104 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 LCN15Q6UWW0 184 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 ZNF730Q6ZMV8 503 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 C16orf82Q7Z2V1 217 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 KCNRGQ8N5I3 272 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 OR10D3Q8NH80 312 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 WASHC3Q9Y3C0 194 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 KLF12Q9Y4X4 402 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 TRBV5-3A0A0A0MS03 114 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 ZNF860A6NHJ4 632 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms