RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 TCF23Q7RTU1 214 aa5.44□□□□□ -1.54
PTPN3-202ENST00000374541 GCSAMQ8N6F7 178 aa5.44□□□□□ -1.54
PTPN3-202ENST00000374541 NEUROG1Q92886 237 aa5.44□□□□□ -1.54
PTPN3-202ENST00000374541 ALG14Q96F25 216 aa5.44□□□□□ -1.54
PTPN3-202ENST00000374541 CHST5Q9GZS9 411 aa5.44□□□□□ -1.54
PTPN3-202ENST00000374541 NUDT3O95989 172 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PPP1R17O96001 155 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SOD3P08294 240 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 TMEM50BP56557 158 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 MEF2BQ02080 365 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 RELQ04864 619 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PRR30Q53SZ7 412 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 IBA57Q5T440 356 aaKnown RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 C17orf47Q8NEP4 570 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 OR8B12Q8NGG6 310 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 FAM110DQ8TAY7 271 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 RNF122Q9H9V4 155 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 WIPI2Q9Y4P8 454 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 CACNA1HO95180 2353 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 TTC28Q96AY4 2481 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 TRAV30A0A087WSZ9 112 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 H0Y980 276 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 S1PR2O95136 353 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 TRGC1P0CF51 173 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 CDX1P47902 265 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 HERPUD1Q15011 391 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PRICKLE4Q2TBC4 344 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 FAM209BQ5JX69 171 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 FAM53AQ6NSI3 398 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PRSS41Q7RTY9 318 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 C11orf44Q8N8P7 122 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 OR10J6PQ8NGY7 276 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SFRP2Q96HF1 295 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 HARBI1Q96MB7 349 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PRO3102Q9H379 93 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 ASCC3Q8N3C0 2202 aaKnown RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 MPTX1A8MV57 137 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 FFAR1O14842 300 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 FSTP19883 344 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 MC5RP33032 325 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 IRF3Q14653 427 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 RNF133Q8WVZ7 376 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 RARRES2Q99969 163 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 ABHD14AQ9BUJ0 271 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PKIBQ9C010 78 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 CBLN4Q9NTU7 201 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 TMEM140Q9NV12 185 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 MRPS18AQ9NVS2 196 aaKnown RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 NUP205Q92621 2012 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 WNT9BO14905 357 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SS18L1O75177 396 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SLC25A16P16260 332 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 MSRB3Q8IXL7 192 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 FADS6Q8N9I5 356 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 ABHD3Q8WU67 409 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SSMEM1Q8WWF3 244 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PPIAL4EA0A075B759 164 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PPIAL4DF5H284 164 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SLC17A3O00476 420 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 ZNHIT1O43257 154 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 SMIM13P0DJ93 91 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PPIAL4FP0DN26 164 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 CKS2P33552 79 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 CXorf66Q5JRM2 361 aaPredicted RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 C11orf68Q9H3H3 251 aaKnown RBP5.43□□□□□ -1.54
PTPN3-202ENST00000374541 CCL28Q9NRJ3 127 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 PPIAL4AQ9Y536 164 aa5.43□□□□□ -1.54
PTPN3-202ENST00000374541 IGHV3-43A0A0B4J1X8 118 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 IGHV3-43DP0DP04 118 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 ZNF250P15622 560 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 CTLA4P16410 223 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 ZFP36L1Q07352 338 aaKnown RBP5.42□□□□□ -1.54
PTPN3-202ENST00000374541 OR8G5Q8NG78 346 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
PTPN3-202ENST00000374541 PTPRQQ9UMZ3 2332 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 PQLC2LA1A4F0 135 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 ASPDHA6ND91 283 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 OR4C45A6NMZ5 311 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 NPIPB8E9PQR5 432 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 TYMSP04818 313 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 RAE1P78406 368 aaKnown RBP5.42□□□□□ -1.54
PTPN3-202ENST00000374541 ROM1Q03395 351 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 MOGAT3Q86VF5 341 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 GP6Q9HCN6 339 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 TNFRSF12AQ9NP84 129 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 HSPB7Q9UBY9 170 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 KCNE5Q9UJ90 142 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 OR51B2Q9Y5P1 312 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 A0A1B0GW15 77 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 FBLL1A6NHQ2 334 aaKnown RBP5.42□□□□□ -1.54
PTPN3-202ENST00000374541 J3QR06 171 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 TIAF1O95411 115 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 TSPOP30536 169 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 PRSS8Q16651 343 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 FAM209AQ5JX71 171 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 MAPK1IP1LQ8NDC0 245 aa5.42□□□□□ -1.54
PTPN3-202ENST00000374541 MRPL32Q9BYC8 188 aaKnown RBP5.42□□□□□ -1.54
PTPN3-202ENST00000374541 ARID2Q68CP9 1835 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms