RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 IL19Q9UHD0 177 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 CELSR2Q9HCU4 2923 aa10.03□□□□□ -0.8
HMGCL-202ENST00000374487 C16orf97H3BN30 126 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 YPEL1O60688 119 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 P0C879 139 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 GATA4P43694 442 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 AWAT1Q58HT5 328 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 ETV3LQ6ZN32 361 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 ZNF561Q8N587 486 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 YPEL2Q96QA6 119 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 OR4C12Q96R67 309 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 UNKLQ9H9P5 680 aaKnown RBP10.02□□□□□ -0.8
HMGCL-202ENST00000374487 GCM1Q9NP62 436 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 CLN8Q9UBY8 286 aa10.02□□□□□ -0.8
HMGCL-202ENST00000374487 SPTBN1Q01082 2364 aaKnown RBP10.02□□□□□ -0.8
HMGCL-202ENST00000374487 CADP27708 2225 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 C7orf77A4D0Y5 90 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 MARCH11A6NNE9 402 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 IGHV1-46P01743 117 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 IGHV3-7P01780 117 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 CEBPGP53567 150 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 FLI1Q01543 452 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-202ENST00000374487 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 NCR3LG1Q68D85 454 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 SP5Q6BEB4 398 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-202ENST00000374487 DEFB108BQ8NET1 73 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 DTD1Q8TEA8 209 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 C14orf79Q96F83 325 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 CIB3Q96Q77 187 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-202ENST00000374487 PSMG3Q9BT73 122 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-202ENST00000374487 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
HMGCL-202ENST00000374487 UBE2L5PA0A1B0GUS4 154 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CEBPZOSA8MTT3 80 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 M0R1X1 148 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 FCGR3BO75015 233 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 OR8U8P0C7N1 319 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 IRF2P14316 349 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 DUTP33316 252 aaKnown RBP10.01□□□□□ -0.81
HMGCL-202ENST00000374487 SERF2P84101 59 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 TMEM14EPQ6UXP3 125 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 WFDC8Q8IUA0 241 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
HMGCL-202ENST00000374487 FAM234AQ9H0X4 552 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 RPRMQ9NS64 109 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 ELOVL5Q9NYP7 299 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CALYQ9NYX4 217 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 PUS1Q9Y606 427 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CHD3Q12873 2000 aaKnown RBP10.01□□□□□ -0.81
HMGCL-202ENST00000374487 F2RL2O00254 374 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CYB5R3P00387 301 aaPredicted RBP10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CTRB1P17538 263 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CHRNB4P30926 498 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 TFF3Q07654 80 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CTRB2Q6GPI1 263 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 OR10P1Q8NGE3 313 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 RXFP4Q8TDU9 374 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 FAM216AQ8WUB2 273 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 CLCC1Q96S66 551 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 AIFM2Q9BRQ8 373 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 PRELID3BQ9Y3B1 194 aa10.01□□□□□ -0.81
HMGCL-202ENST00000374487 TRGV10A0A0A0MS01 117 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 TSPAN9O75954 239 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 IFNA17P01571 189 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 SELLP14151 372 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 PTAFRP25105 342 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 CCKARP32238 428 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 LOXL3P58215 753 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 NUP37Q8NFH4 326 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 TAF15Q92804 592 aaKnown RBP eCLIP10□□□□□ -0.81
HMGCL-202ENST00000374487 ZDHHC16Q969W1 377 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 PINX1Q96BK5 328 aaKnown RBP10□□□□□ -0.81
HMGCL-202ENST00000374487 PARD6GQ9BYG4 376 aaPredicted RBP10□□□□□ -0.81
HMGCL-202ENST00000374487 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
HMGCL-202ENST00000374487 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 PPIHO43447 177 aaKnown RBP9.99□□□□□ -0.81
HMGCL-202ENST00000374487 PROP1O75360 226 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 HPRT1P00492 218 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 CD55P08174 381 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 ZNF134P52741 427 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 ELLP55199 621 aaPredicted RBP9.99□□□□□ -0.81
HMGCL-202ENST00000374487 RHEBQ15382 184 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 ATP6V1FQ16864 119 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 RPL39P5Q59GN2 51 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 SPINK9Q5DT21 86 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 AVPI1Q5T686 147 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 LCN15Q6UWW0 184 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 SSX9Q7RTT3 188 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 CLDND2Q8NHS1 167 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 FAM222BQ8WU58 562 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 S1PR3Q99500 378 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 GNG13Q9P2W3 67 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 FBN2P35556 2912 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 COLCA2A8K830 154 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 SCAF4O95104 1147 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms