RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 GLRXP35754 106 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
HMGA1-203ENST00000374116 CDKN1AP38936 164 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 MDH2P40926 338 aaKnown RBP11.93□□□□□ -0.5
HMGA1-203ENST00000374116 ERVFRD-1P60508 538 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 PSG7Q13046 419 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 SLC35G3Q8N808 338 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 KLF14Q8TD94 323 aaPredicted RBP11.93□□□□□ -0.5
HMGA1-203ENST00000374116 KIAA1456Q9P272 454 aa11.93□□□□□ -0.5
HMGA1-203ENST00000374116 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 GCGP01275 180 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 SRP19P09132 144 aaKnown RBP11.92□□□□□ -0.5
HMGA1-203ENST00000374116 OR13C7P0DN81 318 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 GZMBP10144 247 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 USF2Q15853 346 aaPredicted RBP11.92□□□□□ -0.5
HMGA1-203ENST00000374116 Q6P435 159 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 C5orf24Q7Z6I8 188 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 ZNF695Q8IW36 515 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 CMTM1Q8IZ96 169 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 GAPTQ8N292 157 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 OR52M1Q8NGK5 317 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 ABHD5Q8WTS1 349 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 RDH5Q92781 318 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 SPIN2AQ99865 258 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 SPIN2BQ9BPZ2 258 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
HMGA1-203ENST00000374116 RBFOX3A6NFN3 312 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 EREGO14944 169 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 GOSR1O95249 250 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 TRGC2P03986 189 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
HMGA1-203ENST00000374116 LINC00614P0C842 121 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 TUBG1P23258 451 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 S100GP29377 79 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 UBE2KP61086 200 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 HLA-DRB3P79483 266 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 C20orf204Q6ZNR8 217 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 MOB1BQ7L9L4 216 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 C1orf87Q8N0U7 546 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 ZNF664Q8N3J9 261 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 CABLES2Q9BTV7 478 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 TUBG2Q9NRH3 451 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 PDZD2O15018 2839 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
HMGA1-203ENST00000374116 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 PIGBOS1A0A0B4J2F0 54 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 TMEM210A6NLX4 147 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 MBP02144 154 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 GNMTQ14749 295 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 SELENOHQ8IZQ5 122 aaKnown RBP11.9□□□□□ -0.5
HMGA1-203ENST00000374116 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 FRZBQ92765 325 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 ABHD14BQ96IU4 210 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 CCL19Q99731 98 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 OR2W1Q9Y3N9 320 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 NPIPB11E5RHQ5 1161 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 CYB5BO43169 146 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 NDUFS7O75251 213 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 SNRPCP09234 159 aaKnown RBP11.9□□□□□ -0.5
HMGA1-203ENST00000374116 PGA5P0DJD9 388 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 UCP1P25874 307 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 PPP1CCP36873 323 aaKnown RBP11.9□□□□□ -0.5
HMGA1-203ENST00000374116 DLK1P80370 383 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 ZNF506Q5JVG8 444 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
HMGA1-203ENST00000374116 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 FAM210BQ96KR6 192 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 WFDC1Q9HC57 220 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
HMGA1-203ENST00000374116 RCL1Q9Y2P8 373 aaKnown RBP11.9□□□□□ -0.5
HMGA1-203ENST00000374116 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
HMGA1-203ENST00000374116 ZNF727A8MUV8 499 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 H0Y980 276 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 LY6HO94772 140 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 GCH1P30793 250 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 ZNF718Q3SXZ3 478 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 SMIM3Q9BZL3 60 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 MSL2Q9HCI7 577 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 TAAR3PQ9P1P4 343 aa11.89□□□□□ -0.51
HMGA1-203ENST00000374116 MAP1AP78559 2803 aaPredicted RBP11.89□□□□□ -0.51
HMGA1-203ENST00000374116 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
HMGA1-203ENST00000374116 SH2D1BO14796 132 aa11.88□□□□□ -0.51
HMGA1-203ENST00000374116 PGLYRP1O75594 196 aaPredicted RBP11.88□□□□□ -0.51
HMGA1-203ENST00000374116 DFFBO76075 338 aa11.88□□□□□ -0.51
HMGA1-203ENST00000374116 OR2H2O95918 312 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms