RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 NPFFO15130 113 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 DCAF12L2Q5VW00 463 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 HOGA1Q86XE5 327 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 RARRES2Q99969 163 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 GAPDHP04406 335 aaKnown RBP12.31□□□□□ -0.44
TRAF1-201ENST00000373887 GPX1P07203 203 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 SIGLEC12Q96PQ1 595 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 GPHA2Q96T91 129 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 OR4C45A6NMZ5 311 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 SRIP30626 198 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 FAM209BQ5JX69 171 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 SLC25A34Q6PIV7 304 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 SPAG8Q99932 426 aaPredicted RBP12.31□□□□□ -0.44
TRAF1-201ENST00000373887 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 CELA3AP09093 270 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 LY6DQ14210 128 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
TRAF1-201ENST00000373887 THY1P04216 161 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 SCTP09683 121 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 CXCL2P19875 107 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 ST6GALNAC3Q8NDV1 305 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 NUP214P35658 2090 aaPredicted RBP12.3□□□□□ -0.44
TRAF1-201ENST00000373887 RECKO95980 971 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 CBLN4Q9NTU7 201 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 SF3B6Q9Y3B4 125 aaKnown RBP12.3□□□□□ -0.44
TRAF1-201ENST00000373887 PARP14Q460N5 1801 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 LINC00862A6NCI5 91 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 IL4P05112 153 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 JOSD1Q15040 202 aaPredicted RBP12.3□□□□□ -0.44
TRAF1-201ENST00000373887 REC114Q7Z4M0 266 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 ZNF645Q8N7E2 425 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 BEND2Q8NDZ0 799 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM160Q9NX00 188 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 UQCR10Q9UDW1 63 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM229AB2RXF0 380 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 LEAP2Q969E1 77 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 GRIFINA4D1Z8 144 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 PLA2G10O15496 165 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 RND2P52198 227 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 BIVMQ86UB2 503 aa12.3□□□□□ -0.44
TRAF1-201ENST00000373887 ARL14EPLP0DKL9 152 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 CYB5R2Q6BCY4 276 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 ERASQ7Z444 233 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 ARF6P62330 175 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 OR52M1Q8NGK5 317 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 DIRC2Q96SL1 478 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 NRIP2Q9BQI9 281 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 TLNRD1Q9H1K6 362 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 IGHV3-48P01763 117 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 HSPB1P04792 205 aaKnown RBP12.29□□□□□ -0.44
TRAF1-201ENST00000373887 PMCHL1Q16048 86 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM95Q3KNT9 176 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 RNF115Q9Y4L5 304 aa12.29□□□□□ -0.44
TRAF1-201ENST00000373887 C9JCJ5 164 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 OR2H2O95918 312 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 FOLR2P14207 255 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 CEACAM1P13688 526 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 H0YL77 283 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 HKR1P10072 659 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 ZNF658BQ4V348 819 aaPredicted RBP12.28□□□□□ -0.44
TRAF1-201ENST00000373887 DSPPQ9NZW4 1301 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 AQP10Q96PS8 301 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 RFPL3SP0C7P2 107 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
TRAF1-201ENST00000373887 ZNF345Q14585 488 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 P2RY6Q15077 328 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM45BQ96B21 275 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
TRAF1-201ENST00000373887 PSG9Q00887 426 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 PPP1R32Q7Z5V6 425 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 ZNF430Q9H8G1 570 aaPredicted RBP12.27□□□□□ -0.44
TRAF1-201ENST00000373887 MYOFQ9NZM1 2061 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 TRAV8-6A0A0B4J262 113 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 SNAI2O43623 268 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 HLA-DRB1P01911 266 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 HOXD4P09016 255 aaPredicted RBP12.27□□□□□ -0.44
TRAF1-201ENST00000373887 RPL8P62917 257 aaKnown RBP12.27□□□□□ -0.44
TRAF1-201ENST00000373887 RELQ04864 619 aaPredicted RBP12.27□□□□□ -0.44
TRAF1-201ENST00000373887 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM91Q6ZNR0 172 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 TMEM183AQ8IXX5 376 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 FAM181AQ8N9Y4 354 aa12.27□□□□□ -0.44
TRAF1-201ENST00000373887 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.44
TRAF1-201ENST00000373887 MT-ND6P03923 174 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 CRYBB3P26998 211 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 ZNF79Q15937 498 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 ZNF324BQ6AW86 544 aaPredicted RBP12.27□□□□□ -0.45
TRAF1-201ENST00000373887 C18orf15Q96N68 181 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 ZNF107Q9UII5 783 aaPredicted RBP12.27□□□□□ -0.45
TRAF1-201ENST00000373887 WDR90Q96KV7 1748 aa12.27□□□□□ -0.45
TRAF1-201ENST00000373887 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms