RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TREM1Q9NP99 234 aa16.12■□□□□ 0.17
HDAC1-201ENST00000373548 PRELID3BQ9Y3B1 194 aa16.12■□□□□ 0.17
HDAC1-201ENST00000373548 IGHV1-69-2A0A0G2JMI3 117 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 MED19A0JLT2 244 aaPredicted RBP16.11■□□□□ 0.17
HDAC1-201ENST00000373548 TRIM77I1YAP6 450 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 OR9G9P0C7N8 305 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 LOXP28300 417 aaPredicted RBP16.11■□□□□ 0.17
HDAC1-201ENST00000373548 TMEM14EPQ6UXP3 125 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 LYG1Q8N1E2 194 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF525Q8N782 197 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 LRRC46Q96FV0 321 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 CTSZQ9UBR2 303 aa16.11■□□□□ 0.17
HDAC1-201ENST00000373548 TSPAN15O95858 294 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 SFTPCP11686 197 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 KIR2DS2P43631 304 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 ERVFRD-1P60508 538 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 MRPS11P82912 194 aaKnown RBP16.1■□□□□ 0.17
HDAC1-201ENST00000373548 ATRAIDQ6UW56 229 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 MUC15Q8N387 334 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 FAM213BQ8TBF2 198 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 UQCC1Q9NVA1 299 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 UMAD1C9J7I0 102 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 ZG16O60844 167 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 RBMXL2O75526 392 aaKnown RBP16.1■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF672Q499Z4 452 aaPredicted RBP16.1■□□□□ 0.17
HDAC1-201ENST00000373548 ZDHHC16Q969W1 377 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 OR4C12Q96R67 309 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 GAL3ST2Q9H3Q3 398 aa16.1■□□□□ 0.17
HDAC1-201ENST00000373548 TMA7Q9Y2S6 64 aaKnown RBP16.1■□□□□ 0.17
HDAC1-201ENST00000373548 NDUFB3O43676 98 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 IFNA5P01569 189 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 CCL3L1P16619 93 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 HBG1P69891 147 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 HBG2P69892 147 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 DEFA5Q01523 94 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 TMEM200BQ69YZ2 307 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 SLC25A48Q6ZT89 311 aaKnown RBP16.09■□□□□ 0.17
HDAC1-201ENST00000373548 SSX9Q7RTT3 188 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 DTD1Q8TEA8 209 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 QTRT1Q9BXR0 403 aaKnown RBP16.09■□□□□ 0.17
HDAC1-201ENST00000373548 RNASEK-C17orf49H0YIS7 233 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 CD5P06127 495 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 THBS3P49746 956 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 AARDQ4LEZ3 155 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 LRRC10Q5BKY1 277 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 VKORC1L1Q8N0U8 176 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 OR10A7Q8NGE5 316 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF714Q96N38 554 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 KAAG1Q9UBP8 84 aa16.09■□□□□ 0.17
HDAC1-201ENST00000373548 FAM90A9PA6NNJ1 464 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 DVL1O14640 695 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 M6PRP20645 277 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 SNCAP37840 140 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 OR2B8PP59922 312 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 TFF3Q07654 80 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 SPINK9Q5DT21 86 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 C10orf91Q5T1B1 145 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 THNSL2Q86YJ6 484 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 ZNF383Q8NA42 475 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 OR4S2Q8NH73 311 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 SUN5Q8TC36 379 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 H1FXQ92522 213 aaKnown RBP16.08■□□□□ 0.16
HDAC1-201ENST00000373548 TMEM204Q9BSN7 226 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 ZNRD1Q9P1U0 126 aa16.08■□□□□ 0.16
HDAC1-201ENST00000373548 RELNP78509 3460 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 NQO2P16083 231 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 ERVK-16P61578 105 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 SLC25A24Q6NUK1 477 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 HEPN1Q6WQI6 88 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 LILRB2Q8N423 598 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 COMMD1Q8N668 190 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 ACACBO00763 2458 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 ABCA4P78363 2273 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 CEBPZOSA8MTT3 80 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 PPIHO43447 177 aaKnown RBP16.07■□□□□ 0.16
HDAC1-201ENST00000373548 SLC38A11Q08AI6 406 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 BTN1A1Q13410 526 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 HFEQ30201 348 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 OR8G2PQ6IF36 304 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 ADTRPQ96IZ2 230 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 CIB3Q96Q77 187 aaPredicted RBP16.07■□□□□ 0.16
HDAC1-201ENST00000373548 SCRT1Q9BWW7 348 aa16.07■□□□□ 0.16
HDAC1-201ENST00000373548 TET2Q6N021 2002 aaPredicted RBP16.07■□□□□ 0.16
HDAC1-201ENST00000373548 C9JQL5 133 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 F8W036 122 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 DAOP14920 347 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 DVL1P1P54792 670 aaPredicted RBP16.06■□□□□ 0.16
HDAC1-201ENST00000373548 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.06■□□□□ 0.16
HDAC1-201ENST00000373548 SCGB1C1Q8TD33 95 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 RSG1Q9BU20 258 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 CARHSP1Q9Y2V2 147 aaKnown RBP16.06■□□□□ 0.16
HDAC1-201ENST00000373548 FBXO7Q9Y3I1 522 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 PMS2P5A8MQ11 134 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 LYNX1G3V0Z9 82 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 LYNX1P0DP58 116 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 GUCA2BQ16661 112 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 TMEM140Q9NV12 185 aa16.06■□□□□ 0.16
HDAC1-201ENST00000373548 TRAV3A0A0B4J244 114 aa16.05■□□□□ 0.16
HDAC1-201ENST00000373548 FAM157AC9JC47 383 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms