RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 S1PR2O95136 353 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 SELEP16581 610 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 ZCCHC14Q8WYQ9 949 aaKnown RBP12.42□□□□□ -0.42
COL9A2-202ENST00000372748 OR2D2Q9H210 308 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 PATZ1Q9HBE1 687 aaKnown RBP12.42□□□□□ -0.42
COL9A2-202ENST00000372748 LRRC30A6NM36 301 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 IRF2P14316 349 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 OR3A1P47881 315 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 CEBPDP49716 269 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-202ENST00000372748 THBS3P49746 956 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 EDDM3BP56851 147 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 HOXA4Q00056 320 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-202ENST00000372748 TMEM144Q7Z5S9 345 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 LINC00596Q86U02 117 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 CMTM2Q8TAZ6 248 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 PAM16Q9Y3D7 125 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 CUL9Q8IWT3 2517 aa12.42□□□□□ -0.42
COL9A2-202ENST00000372748 TRBV20OR9-2A0A075B6H5 130 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 FAM90A26D6RGX4 464 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 NPIPB11E5RHQ5 1161 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 SYNGR4O95473 234 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 COL8A2P25067 703 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 CLDN18P56856 261 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 TMEM45BQ96B21 275 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 ZNF703Q9H7S9 590 aaPredicted RBP12.41□□□□□ -0.42
COL9A2-202ENST00000372748 PARD6AQ9NPB6 346 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 WNT2P09544 360 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 CBLN1P23435 193 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 Q6ZWC4 215 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 C5orf30Q96GV9 206 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 POM121L2Q96KW2 1035 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 ZDHHC11Q9H8X9 412 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 ELOVL5Q9NYP7 299 aa12.41□□□□□ -0.42
COL9A2-202ENST00000372748 C17orf98A8MV24 154 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 CDKN1AP38936 164 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 SOX8P57073 446 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 SFRP2Q96HF1 295 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 C12orf49Q9H741 205 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
COL9A2-202ENST00000372748 FOXJ2Q9P0K8 574 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 MSMO1Q15800 293 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 ATP6V1FQ16864 119 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 C21orf62-AS1Q17RA5 79 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 DCAF10Q5QP82 559 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
COL9A2-202ENST00000372748 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 TMEM106BQ9NUM4 274 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 TP53TG3Q9ULZ0 132 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 GOLT1BQ9Y3E0 138 aa12.4□□□□□ -0.42
COL9A2-202ENST00000372748 RPLP1P05386 114 aaKnown RBP12.4□□□□□ -0.43
COL9A2-202ENST00000372748 OR52L2PQ8NGH6 319 aa12.4□□□□□ -0.43
COL9A2-202ENST00000372748 R3HDM4Q96D70 268 aa12.4□□□□□ -0.43
COL9A2-202ENST00000372748 MSL2Q9HCI7 577 aa12.4□□□□□ -0.43
COL9A2-202ENST00000372748 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.43
COL9A2-202ENST00000372748 MRPS18CQ9Y3D5 142 aaKnown RBP12.4□□□□□ -0.43
COL9A2-202ENST00000372748 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 DLEU1O43261 78 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 CD82P27701 267 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 OR1C1Q15619 314 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 WDR86Q86TI4 376 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 APH1AQ96BI3 265 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 OR5B21A6NL26 309 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 C9orf172C9J069 976 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 F2Z2F3 143 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 CDIPTO14735 213 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 SS18L1O75177 396 aaPredicted RBP12.39□□□□□ -0.43
COL9A2-202ENST00000372748 PLGLB1Q02325 96 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 C1orf210Q8IVY1 113 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 VN1R17PQ8TDU5 208 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 HSPB9Q9BQS6 159 aa12.39□□□□□ -0.43
COL9A2-202ENST00000372748 TNRC6AQ8NDV7 1962 aaKnown RBP12.38□□□□□ -0.43
COL9A2-202ENST00000372748 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 F6UZH7 168 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 PDE6DO43924 150 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 SERF1AO75920 110 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 TFF1P04155 84 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 FRMD6-AS1P0C7T7 363 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 KITLGP21583 273 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 LINC00310P59036 64 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 PLP2Q04941 152 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 FOXL1Q12952 345 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 MPC1Q9Y5U8 109 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
COL9A2-202ENST00000372748 J3QT63 122 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 SLC17A3O00476 420 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 NXPH2O95156 264 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 MT-CO3P00414 261 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 NRN1LQ496H8 165 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 MOB1BQ7L9L4 216 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 TMEM251Q8N6I4 163 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms