RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KITLGP21583 273 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 DLX1P56177 255 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 SNRPEP62304 92 aaKnown RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 TLE4Q04727 773 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 KIAA0141Q14154 515 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 MBD3L2Q8NHZ7 208 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 H1FXQ92522 213 aaKnown RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 R3HDM4Q96D70 268 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 AURKAIP1Q9NWT8 199 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 WASF3Q9UPY6 502 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 H3BQ15 152 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 MDKP21741 143 aaPredicted RBP9.77□□□□□ -0.85
PDE6C-201ENST00000371447 FGF7P21781 194 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 RAB5CP51148 216 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 MSMO1Q15800 293 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 GCSAMLQ5JQS6 135 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 DHRS7BQ6IAN0 325 aaPredicted RBP9.77□□□□□ -0.85
PDE6C-201ENST00000371447 ZNF525Q8N782 197 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 GATAD1Q8WUU5 269 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 NEUROG1Q92886 237 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 TMEM204Q9BSN7 226 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 HES4Q9HCC6 221 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.77□□□□□ -0.85
PDE6C-201ENST00000371447 SPG11Q96JI7 2443 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 DSCAMO60469 2012 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 TIMM23BQ5SRD1 257 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 CLEC2AQ6UVW9 174 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 ABHD12Q8N2K0 398 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 C1orf162Q8NEQ5 155 aaPredicted RBP9.77□□□□□ -0.85
PDE6C-201ENST00000371447 LHX4Q969G2 390 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 SLC39A9Q9NUM3 307 aa9.77□□□□□ -0.85
PDE6C-201ENST00000371447 A0A0G2JNJ9 132 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 LRRC30A6NM36 301 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 J3QW42 95 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 GATCO43716 136 aaKnown RBP9.76□□□□□ -0.85
PDE6C-201ENST00000371447 PROP1O75360 226 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 MMP23AO75900 390 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 CRYABP02511 175 aaKnown RBP9.76□□□□□ -0.85
PDE6C-201ENST00000371447 OR9G9P0C7N8 305 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 RPS10P46783 165 aaKnown RBP9.76□□□□□ -0.85
PDE6C-201ENST00000371447 C9orf152Q5JTZ5 239 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 ZNF429Q86V71 674 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 FAM90A1Q86YD7 464 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 DOLPP1Q86YN1 238 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 IL22RA2Q969J5 263 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 PFDN5Q99471 154 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 Q9UFV3 132 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 MALRD1Q5VYJ5 2156 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 CD40P25942 277 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 UBE2G2P60604 165 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 OR10P1Q8NGE3 313 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 RPUSD4Q96CM3 377 aaKnown RBP9.76□□□□□ -0.85
PDE6C-201ENST00000371447 LURAP1Q96LR2 239 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 ZNF737O75373 536 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 OR2C1O95371 312 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 IFNA4P05014 189 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
PDE6C-201ENST00000371447 NECAP1Q8NC96 275 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 RAB39BQ96DA2 213 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 RCC1LQ96I51 464 aaKnown RBP9.76□□□□□ -0.85
PDE6C-201ENST00000371447 SCRT1Q9BWW7 348 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 NDRG3Q9UGV2 375 aa9.76□□□□□ -0.85
PDE6C-201ENST00000371447 DCHS2Q6V1P9 2916 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 TRGV8A0A0C4DH27 118 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 COLCA2A8K830 154 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 A8MXE2 369 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 SRRM5B3KS81 715 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 IGHV1-46P01743 117 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 GLRXP35754 106 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 MBNL2Q5VZF2 373 aaKnown RBP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 LSM10Q969L4 123 aaKnown RBP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 LRFN3Q9BTN0 628 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 PATZ1Q9HBE1 687 aaKnown RBP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 GCM1Q9NP62 436 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 CALYQ9NYX4 217 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 MAP1LC3B2A6NCE7 125 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 SCAF4O95104 1147 aaKnown RBP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 IGKV1D-33P01593 117 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 IGKV1-33P01594 117 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 OR4A8P0C604 315 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 IRF2P14316 349 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 LMO1P25800 156 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 NKX6-1P78426 367 aaPredicted RBP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 BSPH1Q075Z2 132 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 ICAM4Q14773 271 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 MORN2Q502X0 79 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 DMRTC2Q8IXT2 367 aaPredicted RBP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 PPP1R35Q8TAP8 253 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 TAF15Q92804 592 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDE6C-201ENST00000371447 HIST1H2BAQ96A08 127 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 FAM122AQ96E09 287 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 S1PR3Q99500 378 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 SSX3Q99909 188 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms