RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 OR4C13Q8NGP0 309 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 TBX6O95947 436 aaPredicted RBP16.76■□□□□ 0.27
LMO4-202ENST00000370544 FAM3BP58499 235 aaPredicted RBP16.76■□□□□ 0.27
LMO4-202ENST00000370544 IZUMO4Q1ZYL8 232 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 C19orf48Q6RUI8 117 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 SEC16AO15027 2179 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 CKAP5Q14008 2032 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 TFPI2P48307 235 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 ZNF273Q14593 569 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 RALYQ9UKM9 306 aaKnown RBP16.76■□□□□ 0.27
LMO4-202ENST00000370544 MYOFQ9NZM1 2061 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 WNT9BO14905 357 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 LIPFP07098 398 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 OR10J6PQ8NGY7 276 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 DCAF16Q9NXF7 216 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 BET1LQ9NYM9 111 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 TDRD6O60522 2096 aaKnown RBP16.76■□□□□ 0.27
LMO4-202ENST00000370544 GLRXP35754 106 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 MFAP4P55083 255 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 ATP5J2P56134 94 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 TWIST1Q15672 202 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 GUCA2BQ16661 112 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 EBLN2Q6P2I7 272 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 BPIFA4PQ86YQ2 179 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 VKORC1L1Q8N0U8 176 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 GDF9O60383 454 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 UMODP07911 640 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 MFAP2P55001 183 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 PQLC2Q6ZP29 291 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 OR8A1Q8NGG7 326 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 MEGF10Q96KG7 1140 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 CECR9P0C854 216 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 RNF224P0DH78 156 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 MYOZ3Q8TDC0 251 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 POM121Q96HA1 1249 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 COMPP49747 757 aaPredicted RBP16.75■□□□□ 0.27
LMO4-202ENST00000370544 C1QL2Q7Z5L3 287 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 TCF19Q9Y242 345 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 SHISA3A0PJX4 238 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 A8MWL6 223 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 CEACAM1P13688 526 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 FAM27E3Q08E93 113 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 IBA57Q5T440 356 aaKnown RBP16.75■□□□□ 0.27
LMO4-202ENST00000370544 ZNRF1Q8ND25 227 aa16.75■□□□□ 0.27
LMO4-202ENST00000370544 APOBEC3AP31941 199 aaPredicted RBP16.74■□□□□ 0.27
LMO4-202ENST00000370544 PDLIM4P50479 330 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 SCGB1D4Q6XE38 83 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 PNKDQ8N490 385 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 TEX29Q8N6K0 151 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 SMIM8Q96KF7 97 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 FOXD3Q9UJU5 478 aaPredicted RBP16.74■□□□□ 0.27
LMO4-202ENST00000370544 PGPA6NDG6 321 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 M0R143 59 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 NRN1LQ496H8 165 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 ZCCHC14Q8WYQ9 949 aaKnown RBP16.74■□□□□ 0.27
LMO4-202ENST00000370544 RAB24Q969Q5 203 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 C9orf172C9J069 976 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 ACP7Q6ZNF0 438 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 TMEM105Q8N8V8 129 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 POC1AQ8NBT0 407 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 ZNF738Q8NE65 137 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 REG1AP05451 166 aa16.74■□□□□ 0.27
LMO4-202ENST00000370544 FCGR2BP31994 310 aaPredicted RBP16.73■□□□□ 0.27
LMO4-202ENST00000370544 TM4SF20Q53R12 229 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 SLC25A33Q9BSK2 321 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 AP5S1Q9NUS5 200 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 IGLV3-12A0A075B6K2 115 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 TRAV30A0A087WSZ9 112 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 KLK2P20151 261 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 STPG3Q8N7X2 389 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 KBTBD11O94819 623 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 TNFSF10P50591 281 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 DHRS11Q6UWP2 260 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 C1orf162Q8NEQ5 155 aaPredicted RBP16.73■□□□□ 0.27
LMO4-202ENST00000370544 FLVCR1-AS1Q8TAF5 88 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 TP53RKQ96S44 253 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 CCL19Q99731 98 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 TM2D1Q9BX74 207 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 SH3BGRL3Q9H299 93 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 ANKRD36A6QL64 1941 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 ZNF146Q15072 292 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 DNAJC4Q9NNZ3 241 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 HSPB7Q9UBY9 170 aa16.73■□□□□ 0.27
LMO4-202ENST00000370544 SS18L1O75177 396 aaPredicted RBP16.72■□□□□ 0.27
LMO4-202ENST00000370544 SMIM6P0DI80 62 aa16.72■□□□□ 0.27
LMO4-202ENST00000370544 KIR2DL2P43627 348 aaPredicted RBP16.72■□□□□ 0.27
LMO4-202ENST00000370544 LYRM7Q5U5X0 104 aa16.72■□□□□ 0.27
LMO4-202ENST00000370544 MDKP21741 143 aaPredicted RBP16.72■□□□□ 0.27
LMO4-202ENST00000370544 LY6EQ16553 131 aa16.72■□□□□ 0.27
LMO4-202ENST00000370544 OR11H4Q8NGC9 324 aa16.72■□□□□ 0.27
LMO4-202ENST00000370544 C1QTNF5Q9BXJ0 243 aa16.72■□□□□ 0.27
LMO4-202ENST00000370544 MRPS18CQ9Y3D5 142 aaKnown RBP16.71■□□□□ 0.27
LMO4-202ENST00000370544 LOC389332A0A1B0GUA5 103 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 ARL14EPLP0DKL9 152 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 C8orf88P0DMB2 117 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 TMEM56-RWDD3S4R434 201 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 RPL39P5Q59GN2 51 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 FAM57AQ8TBR7 257 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 TMEM106BQ9NUM4 274 aa16.71■□□□□ 0.27
LMO4-202ENST00000370544 CBY3A6NI87 242 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms