RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MIDNQ504T8 468 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 SSX9Q7RTT3 188 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 SLC51BQ86UW2 128 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 Q8N7P7 452 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 ZNF680Q8NEM1 530 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 ZNF471Q9BX82 626 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-202ENST00000369409 CLEC7AQ9BXN2 247 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 COA4Q9NYJ1 87 aa13.69□□□□□ -0.22
PHGDH-202ENST00000369409 PVALBP20472 110 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-202ENST00000369409 ZFP36P26651 326 aaKnown RBP13.68□□□□□ -0.22
PHGDH-202ENST00000369409 P2RY1P47900 373 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 VKORC1L1Q8N0U8 176 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 FAM168AQ92567 244 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 PIMREGQ9BSJ6 248 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 SIRT7Q9NRC8 400 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 SPG11Q96JI7 2443 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 TENM4Q6N022 2769 aa13.68□□□□□ -0.22
PHGDH-202ENST00000369409 J3QKU1 62 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 ZNF137PP52743 207 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 ERVK-16P61578 105 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 VAMP2P63027 116 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 LCN2P80188 198 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 FAM71F2Q6NXP2 309 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 TNFRSF14Q92956 283 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 ST6GALNAC6Q969X2 333 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 PERPQ96FX8 193 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-202ENST00000369409 USP9YO00507 2555 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-202ENST00000369409 M0R1W7 72 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 CHST1O43916 411 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 IFNA7P01567 189 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 IGLV1-47P01700 117 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 NQO2P16083 231 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 IL3RAP26951 378 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 LMO4P61968 165 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 RTL8BQ17RB0 113 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
PHGDH-202ENST00000369409 TET2Q6N021 2002 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-202ENST00000369409 ENSAO43768 121 aaKnown RBP13.66□□□□□ -0.22
PHGDH-202ENST00000369409 GPR137BO60478 399 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 TMEM50AO95807 157 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 APOA2P02652 100 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 OR9G9P0C7N8 305 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 CAV2P51636 162 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 PRRX1P54821 245 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 UBA52P62987 128 aaKnown RBP13.66□□□□□ -0.22
PHGDH-202ENST00000369409 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 CLEC9AQ6UXN8 241 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 PNKDQ8N490 385 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 OR2C3Q8N628 320 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 C10orf105Q8TEF2 133 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 ST8SIA2Q92186 375 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 ASH1LQ9NR48 2969 aaKnown RBP13.66□□□□□ -0.22
PHGDH-202ENST00000369409 ABCA2Q9BZC7 2435 aa13.66□□□□□ -0.22
PHGDH-202ENST00000369409 A8MXK9 166 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 H0YJW9 148 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 SYNGR2O43760 224 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 RBMXL2O75526 392 aaKnown RBP13.65□□□□□ -0.22
PHGDH-202ENST00000369409 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 IAPPP10997 89 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 OR2B8PP59922 312 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 ZNF787Q6DD87 383 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 TGIF2LXQ8IUE1 241 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 BEND2Q8NDZ0 799 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 NABP2Q9BQ15 211 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 SMIM3Q9BZL3 60 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-202ENST00000369409 LYRM2Q9NU23 88 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-202ENST00000369409 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 FBXL17Q9UF56 701 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 UBQLN2Q9UHD9 624 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 FBN2P35556 2912 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 FAM24AA6NFZ4 105 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 H3BP45 60 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 H7C2Y5 167 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 MMP9P14780 707 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 KLRD1Q13241 179 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 GPR157Q5UAW9 335 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 DHRS7BQ6IAN0 325 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-202ENST00000369409 ALKAL2Q6UX46 152 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 OR13D1Q8NGV5 346 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 BSCL2Q96G97 398 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-202ENST00000369409 CYTL1Q9NRR1 136 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 WNK2Q9Y3S1 2297 aa13.65□□□□□ -0.22
PHGDH-202ENST00000369409 NDUFS8O00217 210 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 HTR2BP41595 481 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 PAX9P55771 341 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.23
PHGDH-202ENST00000369409 KIR3DL3Q8N743 410 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 OR5AN1Q8NGI8 311 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 OR4P4Q8NGL7 312 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 RHOVQ96L33 236 aa13.64□□□□□ -0.23
PHGDH-202ENST00000369409 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms