RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NAT1P18440 290 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 GOLT1AQ6ZVE7 132 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 IGHV1-69-2A0A0G2JMI3 117 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 SNAI2O43623 268 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 TIAF1O95411 115 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 RBM38Q9H0Z9 239 aaKnown RBP15.57■□□□□ 0.08
SNX27-202ENST00000368841 DLL3Q9NYJ7 618 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 MAP1LC3AQ9H492 121 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 POLR2AP24928 1970 aaKnown RBP15.57■□□□□ 0.08
SNX27-202ENST00000368841 WFDC12Q8WWY7 111 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 H0YL77 283 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 LAMTOR1Q6IAA8 161 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 RNF115Q9Y4L5 304 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 FAM27BQ5VT28 67 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 CELA3AP09093 270 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 FAM106AQ4KMX7 169 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 RAB24Q969Q5 203 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 ZNF430Q9H8G1 570 aaPredicted RBP15.56■□□□□ 0.08
SNX27-202ENST00000368841 NHSL1Q5SYE7 1610 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 CDS2O95674 445 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 ZNF818PQ6ZRF7 136 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 BIVMQ86UB2 503 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 SHISA5Q8N114 240 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 GCSAMQ8N6F7 178 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 TMEM160Q9NX00 188 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 GLMPQ8WWB7 406 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 LRP5O75197 1615 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 COX6A1P12074 109 aa15.56■□□□□ 0.08
SNX27-202ENST00000368841 FUT5Q11128 374 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 ZNF385CQ66K41 422 aaPredicted RBP15.55■□□□□ 0.08
SNX27-202ENST00000368841 PCSK4Q6UW60 755 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 SUMO2P61956 95 aaKnown RBP15.55■□□□□ 0.08
SNX27-202ENST00000368841 ZCCHC14Q8WYQ9 949 aaKnown RBP15.55■□□□□ 0.08
SNX27-202ENST00000368841 OR51M1Q9H341 326 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 RECKO95980 971 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 OR4D5Q8NGN0 318 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 ZNF418Q8TF45 676 aaPredicted RBP15.55■□□□□ 0.08
SNX27-202ENST00000368841 C11orf44Q8N8P7 122 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 LHFPL6Q9Y693 200 aa15.55■□□□□ 0.08
SNX27-202ENST00000368841 A8MWL6 223 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 SRIP30626 198 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 PDLIM4P50479 330 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 ATAD5Q96QE3 1844 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 TRGV3P03979 118 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 ODAMA1E959 279 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 RNASE4P34096 147 aaKnown RBP15.54■□□□□ 0.08
SNX27-202ENST00000368841 CD69Q07108 199 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 FDCSPQ8NFU4 85 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 PILRBQ9UKJ0 227 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 RBFOX2O43251 390 aaKnown RBP eCLIP15.54■□□□□ 0.087e-16■■■■■ 58.5
SNX27-202ENST00000368841 TFF1P04155 84 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 FHITP49789 147 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 GEMIN7Q9H840 131 aaKnown RBP15.54■□□□□ 0.08
SNX27-202ENST00000368841 KIAA0100Q14667 2235 aaKnown RBP15.54■□□□□ 0.08
SNX27-202ENST00000368841 IL4P05112 153 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 TMEM252Q8N6L7 170 aa15.54■□□□□ 0.08
SNX27-202ENST00000368841 GAGE10A6NGK3 116 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 FAM27E3Q08E93 113 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.53■□□□□ 0.08
SNX27-202ENST00000368841 LINC00305Q7Z4B0 112 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 M0R381 172 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 TMEM222Q9H0R3 208 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 PSG9Q00887 426 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 H1FOOQ8IZA3 346 aaPredicted RBP15.53■□□□□ 0.08
SNX27-202ENST00000368841 EEF1AKMT3Q96AZ1 226 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 TSPAN13O95857 204 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 PLP1P60201 277 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 ZP4Q12836 540 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 FAM131CQ96AQ9 280 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 AHRRA9YTQ3 701 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 RRHO14718 337 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 IRF3Q14653 427 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 SIGLEC12Q96PQ1 595 aa15.53■□□□□ 0.08
SNX27-202ENST00000368841 P2RY4P51582 365 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 UCNP55089 124 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 TAF15Q92804 592 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNX27-202ENST00000368841 LINC00470Q9BZP3 86 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 MARCH11A6NNE9 402 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 DXOO77932 396 aaKnown RBP15.52■□□□□ 0.08
SNX27-202ENST00000368841 MC5RP33032 325 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 SLC25A47Q6Q0C1 308 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 NPIPB3Q92617 1050 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 GZMMP51124 257 aa15.52■□□□□ 0.08
SNX27-202ENST00000368841 DEFB104AQ8WTQ1 72 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 ST6GALNAC6Q969X2 333 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 DPH3P1Q9H4G8 78 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 B4E171 279 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 TSPAN7P41732 249 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 ERASQ7Z444 233 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 DNAJC4Q9NNZ3 241 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 TOMM7Q9P0U1 55 aa15.52■□□□□ 0.07
SNX27-202ENST00000368841 FAM74A7A6NL05 159 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 LEPROTL1O95214 131 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 SEC11BP0C7V7 166 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 HS3ST3B1Q9Y662 390 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 ARFGEF1Q9Y6D6 1849 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 IGKV1D-33P01593 117 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 IGKV1-33P01594 117 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 LHFPL4Q7Z7J7 247 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 FOXA2Q9Y261 457 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms