RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 HARBI1Q96MB7 349 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 SLC2A9Q9NRM0 540 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 PLSCR3Q9NRY6 295 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 SLC2A8Q9NY64 477 aa11.07□□□□□ -0.64
TPM3-211ENST00000368531 C14orf166Q9Y224 244 aaKnown RBP11.07□□□□□ -0.64
TPM3-211ENST00000368531 NBR2O15453 112 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 PLA2G10O15496 165 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 RAMP3O60896 148 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 UPK1BO75841 260 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 AMY1AP04745 511 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 CTSDP07339 412 aaPredicted RBP11.06□□□□□ -0.64
TPM3-211ENST00000368531 ECI1P42126 302 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 BRWD1-AS2P59051 145 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 PLGLAQ15195 96 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 Q6ZSV7 163 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 Q8N9W7 124 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 POC5Q8NA72 575 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 OR4C13Q8NGP0 309 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 TSNAXQ99598 290 aaKnown RBP11.06□□□□□ -0.64
TPM3-211ENST00000368531 RASL11BQ9BPW5 248 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 C19orf24Q9BVV8 132 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 FBXL15Q9H469 300 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 KIAA1456Q9P272 454 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 COPZ2Q9P299 210 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 GPR132Q9UNW8 380 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 VSIG4Q9Y279 399 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 ZFHX3Q15911 3703 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 CUBNO60494 3623 aa11.06□□□□□ -0.64
TPM3-211ENST00000368531 NAP1L6A6NFF2 107 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 M0QZK8 103 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 MPPED1O15442 326 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 LYRM1O43325 122 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 SLC25A17O43808 307 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 HKR1P10072 659 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 KIR2DS2P43631 304 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 RAG2P55895 527 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
TPM3-211ENST00000368531 TMEM177Q53S58 311 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 C11orf88Q6PI97 169 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 CCDC71LQ8N9Z2 235 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 ADAD2Q8NCV1 583 aaKnown RBP11.05□□□□□ -0.64
TPM3-211ENST00000368531 OR8H1Q8NGG4 311 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 OR4S2Q8NH73 311 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 DEDD2Q8WXF8 326 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 ZNF486Q96H40 463 aaPredicted RBP11.05□□□□□ -0.64
TPM3-211ENST00000368531 SCGB3A2Q96PL1 93 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 CLCC1Q96S66 551 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 TSC22D3Q99576 134 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 RTBDNQ9BSG5 229 aaPredicted RBP11.05□□□□□ -0.64
TPM3-211ENST00000368531 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 C5orf66Q9H5L9 145 aa11.05□□□□□ -0.64
TPM3-211ENST00000368531 METTL1Q9UBP6 276 aaKnown RBP11.05□□□□□ -0.64
TPM3-211ENST00000368531 TEX13DA0A0J9YY54 714 aaPredicted RBP11.04□□□□□ -0.64
TPM3-211ENST00000368531 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
TPM3-211ENST00000368531 RRHO14718 337 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 RPA2P15927 270 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 AKR1C4P17516 323 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 F2RP25116 425 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 LPAR6P43657 344 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 IFITM3Q01628 133 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 PSG5Q15238 335 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 SURF2Q15527 256 aaPredicted RBP11.04□□□□□ -0.64
TPM3-211ENST00000368531 SP6Q3SY56 376 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 SSX9Q7RTT3 188 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 TMED4Q7Z7H5 227 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 NPBQ8NG41 125 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 RNF5Q99942 180 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 C7orf50Q9BRJ6 194 aaKnown RBP11.04□□□□□ -0.64
TPM3-211ENST00000368531 ZNF702PQ9H963 129 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
TPM3-211ENST00000368531 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.646e-7■■■□□ 15
TPM3-211ENST00000368531 FGF16O43320 207 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 NDUFA7O95182 113 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 IGLV2-23P01705 113 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 MDKP21741 143 aaPredicted RBP11.03□□□□□ -0.64
TPM3-211ENST00000368531 BTCP35070 178 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 LGALS7P47929 136 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 RND3P61587 244 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 LIN54Q6MZP7 749 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 OR4F5Q8NH21 305 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 OR2T6Q8NHC8 308 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
TPM3-211ENST00000368531 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
TPM3-211ENST00000368531 RANBP3Q9H6Z4 567 aaPredicted RBP11.03□□□□□ -0.64
TPM3-211ENST00000368531 LIN7CQ9NUP9 197 aaKnown RBP11.03□□□□□ -0.64
TPM3-211ENST00000368531 TBC1D24Q9ULP9 559 aa11.03□□□□□ -0.64
TPM3-211ENST00000368531 C3orf85A0A1B0GTC6 90 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 LINC01548A6NM66 108 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 FCN1O00602 326 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 TSPAN9O75954 239 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 S1PR2O95136 353 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 NDUFA3O95167 84 aa11.02□□□□□ -0.65
TPM3-211ENST00000368531 VSIG10L2P0DP72 767 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms