RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 AHRRA9YTQ3 701 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 SRRM5B3KS81 715 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 MGST3O14880 152 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 YPEL1O60688 119 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 SOD3P08294 240 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.51
CD48-201ENST00000368045 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.51
CD48-201ENST00000368045 FABP6P51161 128 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 TRIP6Q15654 476 aaKnown RBP11.9□□□□□ -0.51
CD48-201ENST00000368045 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 OR4F5Q8NH21 305 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 SNX22Q96L94 193 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 YPEL2Q96QA6 119 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 OR4F4Q96R69 305 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 MSL2Q9HCI7 577 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.51
CD48-201ENST00000368045 IGHV3-43A0A0B4J1X8 118 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
CD48-201ENST00000368045 PDE6DO43924 150 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 IGHV3-43DP0DP04 118 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 CCL11P51671 97 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 FDCSPQ8NFU4 85 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 OR51G1Q8NGK1 321 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 RFESDQ8TAC1 157 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 TXNDC17Q9BRA2 123 aa11.89□□□□□ -0.51
CD48-201ENST00000368045 QTRT1Q9BXR0 403 aaKnown RBP11.89□□□□□ -0.51
CD48-201ENST00000368045 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 HRASP01112 189 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 CD1BP29016 333 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 SRP14P37108 136 aaKnown RBP11.88□□□□□ -0.51
CD48-201ENST00000368045 GALR1P47211 349 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 ERVK-16P61578 105 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 MORN2Q502X0 79 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 PRAMEF5Q5TYX0 476 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
CD48-201ENST00000368045 PFDN5Q99471 154 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 GPR61Q9BZJ8 451 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 RAB9BQ9NP90 201 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 ZNF71Q9NQZ8 489 aaPredicted RBP11.88□□□□□ -0.51
CD48-201ENST00000368045 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 PROCRQ9UNN8 238 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 GAB2Q9UQC2 676 aa11.88□□□□□ -0.51
CD48-201ENST00000368045 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 F2RL2O00254 374 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 NKX2-8O15522 239 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
CD48-201ENST00000368045 PAGE4O60829 102 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 GYPAP02724 150 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 OR9G9P0C7N8 305 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 CD99P14209 185 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 OPRK1P41145 380 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 TMPRSS3P57727 454 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 FAM3BP58499 235 aaPredicted RBP11.87□□□□□ -0.51
CD48-201ENST00000368045 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
CD48-201ENST00000368045 Q8N7P7 452 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 TPRX1Q8N7U7 411 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 OR4X1Q8NH49 305 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 OR4A16Q8NH70 328 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 BTF3L4Q96K17 158 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 KCNIP2Q9NS61 270 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 FZR1Q9UM11 496 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 GPR179Q6PRD1 2367 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 DOCK7Q96N67 2140 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 C11orf94C9JXX5 98 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 PPP5D1E7EU14 171 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 F6UZH7 168 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
CD48-201ENST00000368045 FCGR3BO75015 233 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
CD48-201ENST00000368045 CGAP01215 116 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 TFF1P04155 84 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 TYMSP04818 313 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 HIST1H1BP16401 226 aaKnown RBP11.87□□□□□ -0.51
CD48-201ENST00000368045 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 FAM209BQ5JX69 171 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 GFI1BQ5VTD9 330 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 OR2Z1Q8NG97 314 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 S100PBPQ96BU1 408 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 GFOD1Q9NXC2 390 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 SLC25A15Q9Y619 301 aa11.87□□□□□ -0.51
CD48-201ENST00000368045 M0R1X1 148 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 TMPRSS2O15393 492 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 TNFSF13O75888 250 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
CD48-201ENST00000368045 HNF4GQ14541 408 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 C3orf36Q3SXR2 165 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 ZNF383Q8NA42 475 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 ACY3Q96HD9 319 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 FAM186AA6NE01 2351 aa11.86□□□□□ -0.51
CD48-201ENST00000368045 TRGV8A0A0C4DH27 118 aa11.85□□□□□ -0.51
CD48-201ENST00000368045 PROP1O75360 226 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms