RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 GPR148Q8TDV2 347 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 DLX4Q92988 240 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 UBE2E2Q96LR5 201 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 MYCBPQ99417 103 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF184Q99676 751 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 MRPL20Q9BYC9 149 aaKnown RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ANKRD60Q9BZ19 345 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 BANF2Q9H503 90 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 SCPEP1Q9HB40 452 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 PALMDQ9NP74 551 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 TMEM138Q9NPI0 162 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 PAK1IP1Q9NWT1 392 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 IL36GQ9NZH8 169 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 VSIG4Q9Y279 399 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 TRAV8-7A0A075B6U6 113 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 A0A087WW49 117 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 IGHV7-81A0A0B4J1V7 117 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 TRAV41A0A0B4J266 112 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 A0A1W2PN81 502 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 A0A1W2PPK0 400 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 TRIM64CA6NLI5 447 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 FAM90A26D6RGX4 464 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 NBR2O15453 112 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 LANCL1O43813 399 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 CFC1BP0CG36 223 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 CFC1P0CG37 223 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 LIMS3P0CW19 117 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 LIMS4P0CW20 117 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 GP9P14770 177 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 BLVRBP30043 206 aaPredicted RBP3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 CHRNA7P36544 502 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 PPP1CCP36873 323 aaKnown RBP3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ETV1P50549 477 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RAB9AP51151 201 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 INSL3P51460 131 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF137PP52743 207 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 NDPQ00604 133 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RUNX1Q01196 453 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RAB40BQ12829 278 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RIPK1Q13546 671 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ECSCRQ19T08 205 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 Q3ZCU0 254 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 MORN2Q502X0 79 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 C6orf183Q5T699 404 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RAB12Q6IQ22 244 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RPL22L1Q6P5R6 122 aaKnown RBP3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF429Q86V71 674 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 JAGN1Q8N5M9 183 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZFP41Q8N8Y5 198 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 TMEM116Q8NCL8 245 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RHOXF1Q8NHV9 184 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ARPC1AQ92747 370 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ST6GAL2Q96JF0 529 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 Q96MT0 163 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 NABP2Q9BQ15 211 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF251Q9BRH9 671 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR51J1Q9H342 316 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 TAF9BQ9HBM6 251 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR2S2Q9NQN1 319 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 FBXO7Q9Y3I1 522 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 PEX16Q9Y5Y5 336 aa3.96□□□□□ -1.78
RNU4-4P-201ENST00000364588 RYR2Q92736 4967 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 LCE6AA0A183 80 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 PNMA8CA0A1B0GUJ8 204 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 LOC100130705A0A1B0GUX0 176 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 LINC01619G3V211 115 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 SOX15O60248 233 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF780AO75290 641 aaPredicted RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 BAG2O95816 211 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 LALBAP00709 142 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 IGHV3-11P01762 117 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 HLA-DRB1P01911 266 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 MAS1P04201 325 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 CLEC3BP05452 202 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 IGFBP3P17936 291 aaPredicted RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR3A3P47888 321 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 GPR176Q14439 515 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 PLGLAQ15195 96 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 LRRC36Q1X8D7 754 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 C5orf64Q2M2E5 130 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 TMEM30BQ3MIR4 351 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 CCDC58Q4VC31 144 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 GLIPR1L1Q6UWM5 242 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 ADAMTSL5Q6ZMM2 481 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 TMPRSS11AQ6ZMR5 421 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR6Q1Q8NGQ2 317 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 APH1BQ8WW43 257 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 GHSRQ92847 366 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 FAM46BQ96A09 425 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 SMIM19Q96E16 107 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 MRPS24Q96EL2 167 aaKnown RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 MS4A10Q96PG2 267 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 SLC29A1Q99808 456 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 CHCHD6Q9BRQ6 235 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 SELENOIQ9C0D9 397 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 TOLLIPQ9H0E2 274 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 FBXL15Q9H469 300 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms