RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 IL36RNQ9UBH0 155 aa15.82■□□□□ 0.12
CLIP2-202ENST00000361545 PINLYPA6NC86 204 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 ZNF735P0CB33 412 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 ACP7Q6ZNF0 438 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 ZNF818PQ6ZRF7 136 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 ISOC2Q96AB3 205 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 SSBP3Q9BWW4 388 aaPredicted RBP15.81■□□□□ 0.12
CLIP2-202ENST00000361545 A0A1W2PS18 150 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 H0YL77 283 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 SEC11BP0C7V7 166 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 FCGR2BP31994 310 aaPredicted RBP15.81■□□□□ 0.12
CLIP2-202ENST00000361545 HSPE1P61604 102 aaKnown RBP15.81■□□□□ 0.12
CLIP2-202ENST00000361545 PRO1933Q9H354 126 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 COL6A6A6NMZ7 2263 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 TMEM14DPA8MWL7 114 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 PRSS1P07477 247 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 DLK1P80370 383 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 RIGQ13278 110 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 RPL39P5Q59GN2 51 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 SELENOHQ8IZQ5 122 aaKnown RBP15.81■□□□□ 0.12
CLIP2-202ENST00000361545 ZNF738Q8NE65 137 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 OR2D3Q8NGH3 330 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 RALGAPA2Q2PPJ7 1873 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 MFAP4P55083 255 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 FXYD3Q14802 87 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 SPANXN1Q5VSR9 72 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 POM121Q96HA1 1249 aa15.81■□□□□ 0.12
CLIP2-202ENST00000361545 QTRT1Q9BXR0 403 aaKnown RBP15.81■□□□□ 0.12
CLIP2-202ENST00000361545 ZG16O60844 167 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 RTN4RQ9BZR6 473 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 DEDDO75618 318 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 KLHDC1Q8N7A1 406 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 TMEM116Q8NCL8 245 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 SEC11CQ9BY50 192 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 DOCK6Q96HP0 2047 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 BMPR1BO00238 502 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 MIC13Q5XKP0 118 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 ASPHD2Q6ICH7 369 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 MFSD2BA6NFX1 497 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 TMEM78Q5T7P6 136 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 GBGT1Q8N5D6 347 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 DRAM1Q8N682 238 aa15.8■□□□□ 0.12
CLIP2-202ENST00000361545 NEU4Q8WWR8 484 aaPredicted RBP15.8■□□□□ 0.12
CLIP2-202ENST00000361545 RNASE6Q93091 150 aaKnown RBP15.8■□□□□ 0.12
CLIP2-202ENST00000361545 DNM1P46Q6ZS02 220 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 SNCGO76070 127 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 TGFAP01135 160 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 ATP5G2Q06055 141 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 FAM106AQ4KMX7 169 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 OR5AU1Q8NGC0 362 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 OR4B1Q8NGF8 309 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 MRPS18CQ9Y3D5 142 aaKnown RBP15.79■□□□□ 0.12
CLIP2-202ENST00000361545 CHD5Q8TDI0 1954 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 GREB1Q4ZG55 1949 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 SLC35E4Q6ICL7 350 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 OR10J6PQ8NGY7 276 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 VAMP8Q9BV40 100 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 TMEM218A2RU14 115 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 C7orf66A4D0T2 115 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 SELENOTP62341 195 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 OR52M1Q8NGK5 317 aa15.79■□□□□ 0.12
CLIP2-202ENST00000361545 ZNF253O75346 499 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 ZCCHC24Q8N2G6 241 aaKnown RBP15.78■□□□□ 0.12
CLIP2-202ENST00000361545 ANAPC16Q96DE5 110 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 ZNF430Q9H8G1 570 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-202ENST00000361545 PEAR1Q5VY43 1037 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-202ENST00000361545 LAIR2Q6ISS4 152 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 C5orf66Q9H5L9 145 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 SPRR3Q9UBC9 169 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 CACNA1BQ00975 2339 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 TEX50A0A1B0GTY4 177 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 PMS2P11Q13670 270 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 ZNF236Q9UL36 1845 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 SS18L1O75177 396 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-202ENST00000361545 HIST1H1BP16401 226 aaKnown RBP15.78■□□□□ 0.12
CLIP2-202ENST00000361545 GTF2H5Q6ZYL4 71 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 LSM10Q969L4 123 aaKnown RBP15.78■□□□□ 0.12
CLIP2-202ENST00000361545 POLEQ07864 2286 aa15.78■□□□□ 0.12
CLIP2-202ENST00000361545 PGA5P0DJD9 388 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 LINC00114Q6XXX2 140 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 HSD17B13Q7Z5P4 300 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-202ENST00000361545 OR10C1Q96KK4 312 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 OR4C12Q96R67 309 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 PARD6AQ9NPB6 346 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 KBTBD11O94819 623 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 HNRNPA3P51991 378 aaKnown RBP15.77■□□□□ 0.12
CLIP2-202ENST00000361545 TCF19Q9Y242 345 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 SERF2P84101 59 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 C1QTNF5Q9BXJ0 243 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 C7orf69Q9H7B7 122 aa15.77■□□□□ 0.12
CLIP2-202ENST00000361545 ESPL1Q14674 2120 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 C17orf100A8MU93 164 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 C1QL1O75973 258 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 CRISP2P16562 243 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 TNFRSF9Q07011 255 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 THADAQ6YHU6 1953 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 IGKV3D-15A0A087WSY6 115 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 C12orf77C9JDV5 145 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 H3BQ15 152 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 IGKV3-15P01624 115 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms