RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 IGKV3D-15A0A087WSY6 115 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 IGKV1D-43A0A0B4J1Z2 117 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 LINC00862A6NCI5 91 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 SPINK4O60575 86 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 RPS11P62280 158 aaKnown RBP eCLIP11.46□□□□□ -0.57
LDB3-202ENST00000361373 DRAM1Q8N682 238 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
LDB3-202ENST00000361373 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 OR10J6PQ8NGY7 276 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 C5orf66Q9H5L9 145 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 ZNHIT1O43257 154 aa11.46□□□□□ -0.58
LDB3-202ENST00000361373 RND2P52198 227 aa11.46□□□□□ -0.58
LDB3-202ENST00000361373 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.58
LDB3-202ENST00000361373 ALPK2Q86TB3 2170 aa11.46□□□□□ -0.58
LDB3-202ENST00000361373 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 HCP5Q6MZN7 132 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 FABP4P15090 132 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 CRISP2P16562 243 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 RPL7P18124 248 aaKnown RBP11.45□□□□□ -0.58
LDB3-202ENST00000361373 TIMP3P35625 211 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 PTTG1IPP53801 180 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 CXorf66Q5JRM2 361 aaPredicted RBP11.45□□□□□ -0.58
LDB3-202ENST00000361373 GBGT1Q8N5D6 347 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 SSBP3Q9BWW4 388 aaPredicted RBP11.45□□□□□ -0.58
LDB3-202ENST00000361373 SCN5AQ14524 2016 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 SCO1O75880 301 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 WNT5AP41221 380 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 FBLN5Q9UBX5 448 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 TMEM56-RWDD3S4R434 201 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 DLK1P80370 383 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
LDB3-202ENST00000361373 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 ZNRF1Q8ND25 227 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 OR10C1Q96KK4 312 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 OR5AC2Q9NZP5 309 aa11.45□□□□□ -0.58
LDB3-202ENST00000361373 A8MWL6 223 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 OR5AL1P0C617 328 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 RND3P61587 244 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 NHLH1Q02575 133 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 FAM168AQ92567 244 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 SBF1O95248 1867 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 A0A1B0GTI1 187 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 LDLRAD3Q86YD5 345 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 DNAJC4Q9NNZ3 241 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 LINC00312Q9Y6C7 94 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 IGHV3-21A0A0B4J1V1 117 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 H3BQ15 152 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 TMEM187Q14656 261 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 ELOA3CA0A087WX78 387 aaPredicted RBP11.44□□□□□ -0.58
LDB3-202ENST00000361373 C7orf77A4D0Y5 90 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 S1PR2O95136 353 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 ZNF818PQ6ZRF7 136 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 GTF3AQ92664 365 aaKnown RBP11.44□□□□□ -0.58
LDB3-202ENST00000361373 EEF1AKMT3Q96AZ1 226 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 MS4A10Q96PG2 267 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 TLNRD1Q9H1K6 362 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 ZNF253O75346 499 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 SSTR5P35346 364 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
LDB3-202ENST00000361373 GREB1Q4ZG55 1949 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 PSG9Q00887 426 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 FXYD3Q14802 87 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 SRD5A3Q9H8P0 318 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 CCKARP32238 428 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 HLA-DRB5Q30154 266 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 RGP1Q92546 391 aaPredicted RBP11.43□□□□□ -0.58
LDB3-202ENST00000361373 SLC25A33Q9BSK2 321 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 ELF5Q9UKW6 265 aaPredicted RBP11.43□□□□□ -0.58
LDB3-202ENST00000361373 SDK2Q58EX2 2172 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 PQLC2LA1A4F0 135 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 LYPD3O95274 346 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 C8orf88P0DMB2 117 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 CCL1P22362 96 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 TM4SF20Q53R12 229 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 TMEM116Q8NCL8 245 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 OR5AU1Q8NGC0 362 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 CBLN4Q9NTU7 201 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 KCNAB3O43448 404 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 SLC16A13Q7RTY0 426 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 OR51G1Q8NGK1 321 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 GALNT14Q96FL9 552 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 OR4C12Q96R67 309 aa11.43□□□□□ -0.58
LDB3-202ENST00000361373 WBP1Q96G27 269 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
LDB3-202ENST00000361373 HSPB1P04792 205 aaKnown RBP11.42□□□□□ -0.58
LDB3-202ENST00000361373 ERVS71-1P61550 626 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 RUNX1Q01196 453 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 GATAD1Q8WUU5 269 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 ADAM11O75078 769 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 HKR1P10072 659 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 TOMM20LQ6UXN7 152 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms