RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
EPHB4-202ENST00000360620 DEFB123Q8N688 67 aa10.18□□□□□ -0.78
EPHB4-202ENST00000360620 TCTEX1D1Q8N7M0 179 aa10.18□□□□□ -0.78
EPHB4-202ENST00000360620 RBMXL3Q8N7X1 1067 aaKnown RBP10.18□□□□□ -0.78
EPHB4-202ENST00000360620 DEFB108BQ8NET1 73 aa10.18□□□□□ -0.78
EPHB4-202ENST00000360620 ZDHHC16Q969W1 377 aa10.18□□□□□ -0.78
EPHB4-202ENST00000360620 TMEM68Q96MH6 324 aa10.18□□□□□ -0.78
EPHB4-202ENST00000360620 HSD17B10Q99714 261 aaKnown RBP10.18□□□□□ -0.78
EPHB4-202ENST00000360620 ODAMA1E959 279 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 HBZP02008 142 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 MIC13Q5XKP0 118 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 GATAD1Q8WUU5 269 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 SIGLEC12Q96PQ1 595 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 NPCDR1Q9BY65 106 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 PRDM13Q9H4Q3 707 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 SH2D2AQ9NP31 389 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 TIMM9Q9Y5J7 89 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 PXMP4Q9Y6I8 212 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 A0A0G2JMM0 328 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 A0A1W2PPB8 328 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 A0A1W2PRS3 328 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 LRRC30A6NM36 301 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 KIR3DP1A8MWS1 328 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 TCF21O43680 179 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 DEFA4P12838 97 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 UBE2G1P62253 170 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 TRA2AQ13595 282 aaKnown RBP eCLIP10.17□□□□□ -0.78
EPHB4-202ENST00000360620 COL5A1-AS1Q5SY13 56 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 ACSM6Q6P461 480 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 MDP1Q86V88 176 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 SLC45A2Q9UMX9 530 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 C2orf16Q68DN1 1984 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 NAPSAO96009 420 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 HPRT1P00492 218 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 CYC1P08574 325 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 IL3RAP26951 378 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 ATP5G3P48201 142 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 RND2P52198 227 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 UCP2P55851 309 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 ZNF718Q3SXZ3 478 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 WDR73Q6P4I2 378 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 SFRP2Q96HF1 295 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 SLC35E1Q96K37 410 aa10.17□□□□□ -0.78
EPHB4-202ENST00000360620 MRPL18Q9H0U6 180 aaKnown RBP10.17□□□□□ -0.78
EPHB4-202ENST00000360620 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 RSPO1Q2MKA7 263 aaPredicted RBP10.16□□□□□ -0.78
EPHB4-202ENST00000360620 ZNF645Q8N7E2 425 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 PKIBQ9C010 78 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 OR5G3P0C626 314 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 BRS3P32247 399 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 TMEM42Q69YG0 159 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 SLC25A40Q8TBP6 338 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 ABCA1O95477 2261 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 USF3Q68DE3 2245 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 FOXI3A8MTJ6 420 aaPredicted RBP10.16□□□□□ -0.78
EPHB4-202ENST00000360620 BTF3P20290 206 aaKnown RBP10.16□□□□□ -0.78
EPHB4-202ENST00000360620 WNT5AP41221 380 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 SSPNQ14714 243 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 SCCPDHQ8NBX0 429 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 OR5P3Q8WZ94 311 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 FER1L6-AS2Q96M78 137 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 C2orf88Q9BSF0 95 aa10.16□□□□□ -0.78
EPHB4-202ENST00000360620 HELTA6NFD8 242 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 PGPEP1LA6NFU8 196 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 MARCH11A6NNE9 402 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 ALKBH6Q3KRA9 238 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 RNASEKQ6P5S7 137 aaKnown RBP10.15□□□□□ -0.78
EPHB4-202ENST00000360620 Q6ZRM9 215 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 ZNF826PQ6ZT77 177 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 C11orf42Q8N5U0 333 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 TMEM178AQ8NBL3 297 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 SLC24A4Q8NFF2 622 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 DNASE2BQ8WZ79 361 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 WDYHV1Q96HA8 205 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 QTRT1Q9BXR0 403 aaKnown RBP10.15□□□□□ -0.78
EPHB4-202ENST00000360620 ARL2-SNX15V9GYD0 113 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 ZNF716A6NP11 495 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 MT-CO3P00414 261 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 C1QTNF9P0C862 333 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 MRPL14Q6P1L8 145 aaKnown RBP10.15□□□□□ -0.78
EPHB4-202ENST00000360620 TCF23Q7RTU1 214 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 MAFAQ8NHW3 353 aaPredicted RBP10.15□□□□□ -0.78
EPHB4-202ENST00000360620 LRRC29Q8WV35 223 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 IMMP1LQ96LU5 166 aa10.15□□□□□ -0.78
EPHB4-202ENST00000360620 CDX2Q99626 313 aaPredicted RBP10.15□□□□□ -0.78
EPHB4-202ENST00000360620 CLDN14O95500 239 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 CAMPP49913 170 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 ARL16Q0P5N6 197 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 ZNF324BQ6AW86 544 aaPredicted RBP10.15□□□□□ -0.79
EPHB4-202ENST00000360620 LYG1Q8N1E2 194 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 OR2M7Q8NG81 312 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 CT55Q8WUE5 264 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 ZCCHC14Q8WYQ9 949 aaKnown RBP10.15□□□□□ -0.79
EPHB4-202ENST00000360620 TXNDC17Q9BRA2 123 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 COMMD5Q9GZQ3 224 aa10.15□□□□□ -0.79
EPHB4-202ENST00000360620 TRGV5A0A0B4J1U4 118 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms