RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CGB1A6NKQ9 187 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 DANCRP0C864 163 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 COL10A1Q03692 680 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 IGHV3OR16-12A0A075B7B8 117 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 LRTM2Q8N967 370 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 VKORC1L1Q8N0U8 176 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 C8orf88P0DMB2 117 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 FAM106AQ4KMX7 169 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 FLRT3Q9NZU0 649 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 PGPEP1LA6NFU8 196 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 KIR3DL3Q8N743 410 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 AMER3Q8N944 861 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 HIST1H2BAQ96A08 127 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 FMC1Q96HJ9 113 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 IGLV3-16A0A075B6K0 115 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 ASIPP42127 132 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 CD1AP06126 327 aa8.06□□□□□ -1.12
VPS13A-203ENST00000360280 PLNP26678 52 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 HIKESHIQ53FT3 197 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 IFNL4K9M1U5 179 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 PAX2Q02962 417 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 CADM4Q8NFZ8 388 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 RTN4RQ9BZR6 473 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 G6PC2Q9NQR9 355 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 A0A1B0GTL3 188 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 hCG_38984A0A1B0GV85 526 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 MPZL1O95297 269 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 ISG15P05161 165 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 GRIFINA4D1Z8 144 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 PSMB11A5LHX3 300 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 MDKP21741 143 aaPredicted RBP8.05□□□□□ -1.12
VPS13A-203ENST00000360280 Q6ZNB5 142 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 PTPRFP10586 1907 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 CLEC2AQ6UVW9 174 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 MARS2Q96GW9 593 aaKnown RBP8.05□□□□□ -1.12
VPS13A-203ENST00000360280 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 GCM2O75603 506 aaPredicted RBP8.05□□□□□ -1.12
VPS13A-203ENST00000360280 CEACAM4O75871 244 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 SBF1O95248 1867 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 TM4SF4P48230 202 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 C18orf15Q96N68 181 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 SLC25A2Q9BXI2 301 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 PAPPA2Q9BXP8 1791 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
VPS13A-203ENST00000360280 SPINK14Q6IE38 97 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 TINAGQ9UJW2 476 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 NRXN3Q9Y4C0 1643 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 TMEM249Q2WGJ8 235 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 SERGEFQ9UGK8 458 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 CRPP02741 224 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 MALP21145 153 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 ATP5IP56385 69 aaPredicted RBP8.05□□□□□ -1.12
VPS13A-203ENST00000360280 CENPWQ5EE01 88 aa8.05□□□□□ -1.12
VPS13A-203ENST00000360280 TRAV21A0A0B4J279 112 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A10PA6NDY2 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A18PA6NE21 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A16PA6NEW6 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A20PA6NIJ5 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A8PA6NJQ4 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A7PA6NKC0 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A22PA8MWA6 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A12PA8MX19 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A5PA8MXJ8 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A23PA8MXZ1 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A15PP0C7V4 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A13PP0C7W8 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A14PP0C7W9 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FAM90A24PP0C7X0 464 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 GPX4P36969 197 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PPIAL4EA0A075B759 164 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PGPA6NDG6 321 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 GGTLC3B5MD39 225 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PPIAL4DF5H284 164 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PPIAL4FP0DN26 164 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 CXCL2P19875 107 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PPIAL4AQ9Y536 164 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ZNF79Q15937 498 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ACSF3Q4G176 576 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-203ENST00000360280 CFAP161Q6P656 301 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 MARVELD3Q96A59 401 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ZNF146Q15072 292 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 IGHV5-51A0A0C4DH38 117 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ZNF660Q6AZW8 331 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-203ENST00000360280 DNM1P46Q6ZS02 220 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 CLDN14O95500 239 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ATG4DQ86TL0 474 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-203ENST00000360280 MS4A6AQ9H2W1 248 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 FSTP19883 344 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 REG1BP48304 166 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 TNFRSF9Q07011 255 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 TMEM30BQ3MIR4 351 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 H0YL77 283 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PRSS23O95084 383 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 CBLN1P23435 193 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms