RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 GSX2Q9BZM3 304 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 SLC25A32Q9H2D1 315 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 BARX1Q9HBU1 254 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR5AC2Q9NZP5 309 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 SOD3P08294 240 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 SELLP14151 372 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 HTR2BP41595 481 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 ERVFRD-1P60508 538 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 GNB2P62879 340 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 HOXA4Q00056 320 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 EIF4EBP1Q13541 118 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 MIDNQ504T8 468 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 CLLU1Q5K131 121 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR2C3Q8N628 320 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 DMBX1Q8NFW5 382 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 C8orf46Q8TAG6 207 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 PERPQ96FX8 193 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 HEXA-AS1Q9H8Q6 139 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 C19orf12Q9NSK7 152 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 DCAF16Q9NXF7 216 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 RCL1Q9Y2P8 373 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 WSB1Q9Y6I7 421 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 SESN1Q9Y6P5 492 aa8.84□□□□□ -0.99
TRAPPC4-201ENST00000359005 PLCE1Q9P212 2302 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 A0A087X0M5 115 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 PPIAL4CA0A0B4J2A2 164 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 A0A1B0GX30 115 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 C17orf98A8MV24 154 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 H0YIZ8 118 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 SYNGR2O43760 224 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 FCGR3BO75015 233 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 DFFBO76075 338 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 SPDEFO95238 335 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 KRASP01116 189 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 PPIAL4GP0DN37 164 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 HKR1P10072 659 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 EPHA1P21709 976 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 OMGP23515 440 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 MC5RP33032 325 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 RAB13P51153 203 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 CAV2P51636 162 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 HBG1P69891 147 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 HBG2P69892 147 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 ZNF816Q0VGE8 651 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-201ENST00000359005 ZNF585BQ52M93 769 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 CT45A1Q5HYN5 189 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 Q5PR19 223 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 PRAMEF5Q5TYX0 476 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 LYPD2Q6UXB3 125 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 BTNL3Q6UXE8 466 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 BAP18Q8IXM2 172 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 PDZD9Q8IXQ8 264 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 ZNF439Q8NDP4 499 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 OR13D1Q8NGV5 346 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 OR4A16Q8NH70 328 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 CT45A3Q8NHU0 189 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 ZNF596Q8TC21 504 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 GPR146Q96CH1 333 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 R3HDM4Q96D70 268 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 CCL19Q99731 98 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 PARP12Q9H0J9 701 aaKnown RBP8.83□□□□□ -1
TRAPPC4-201ENST00000359005 TMEM133Q9H2Q1 129 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 IFI27L2Q9H2X8 130 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 PATZ1Q9HBE1 687 aaKnown RBP8.83□□□□□ -1
TRAPPC4-201ENST00000359005 LYRM2Q9NU23 88 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-201ENST00000359005 FKBP11Q9NYL4 201 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 CACNG5Q9UF02 275 aa8.83□□□□□ -1
TRAPPC4-201ENST00000359005 RAI1Q7Z5J4 1906 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-201ENST00000359005 SAA2-SAA4A0A096LPE2 208 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 MARCH11A6NNE9 402 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 J3QR06 171 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 M0R1W7 72 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 NDUFS8O00217 210 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 SSSCA1O60232 199 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 PITX3O75364 302 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 LY6G6DO95868 133 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 SAA2P0DJI9 122 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-201ENST00000359005 IGHV1-8P0DP01 117 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 FOSL1P15407 271 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 CEACAM3P40198 252 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 PDLIM4P50479 330 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 ZNF273Q14593 569 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 WDR25Q64LD2 544 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-201ENST00000359005 C1orf122Q6ZSJ8 110 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 VSTM2AQ8TAG5 236 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 OSR1Q8TAX0 266 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-201ENST00000359005 SMIM8Q96KF7 97 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 Q96MF0 132 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 PCGF1Q9BSM1 259 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 SSBP3Q9BWW4 388 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-201ENST00000359005 PFDN2Q9UHV9 154 aa8.82□□□□□ -1
TRAPPC4-201ENST00000359005 HIVEP2P31629 2446 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 ATRQ13535 2644 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 NUDT19A8MXV4 375 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 OVOL3O00110 214 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 CHST1O43916 411 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 NDUFS7O75251 213 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 ATP6V1G1O75348 118 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 S1PR2O95136 353 aa8.81□□□□□ -1
TRAPPC4-201ENST00000359005 GNG10P50151 68 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms