RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CACNA1DQ01668 2161 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 DOCK4Q8N1I0 1966 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 ANKRD36A6QL64 1941 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 TRBV9A0A0B4J1U6 114 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 TIAF1O95411 115 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 LINC00271P0C7V0 271 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 H2BFSP57053 126 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 GUCA2BQ16661 112 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 GALNT14Q96FL9 552 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 UBTD1Q9HAC8 227 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 CLEC5AQ9NY25 188 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 HEATR5BQ9P2D3 2071 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 C8orf88P0DMB2 117 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 RND3P61587 244 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 IBA57Q5T440 356 aaKnown RBP10.07□□□□□ -0.8
COL9A1-202ENST00000357250 MRPL37Q9BZE1 423 aaKnown RBP10.07□□□□□ -0.8
COL9A1-202ENST00000357250 MPTX1A8MV57 137 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 DNM1P46Q6ZS02 220 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 OR9G1Q8NH87 305 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 KLF14Q8TD94 323 aaPredicted RBP10.07□□□□□ -0.8
COL9A1-202ENST00000357250 A0A1W2PRD5 423 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 A0A1W2PRF3 423 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 A0A1W2PRM7 423 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 MARCH11A6NNE9 402 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 NDUFB4O95168 129 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 SPSB4Q96A44 273 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 GGACTQ9BVM4 153 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
COL9A1-202ENST00000357250 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM140Q9NV12 185 aa10.07□□□□□ -0.8
COL9A1-202ENST00000357250 MRPS18CQ9Y3D5 142 aaKnown RBP10.07□□□□□ -0.8
COL9A1-202ENST00000357250 ZFHX2Q9C0A1 2572 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 RPL7P18124 248 aaKnown RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 WNT5AP41221 380 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 CA7P43166 264 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 UNC119Q13432 240 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 WDR31Q8NA23 367 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF383Q8NA42 475 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF146Q15072 292 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 C1orf162Q8NEQ5 155 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 DNAJC4Q9NNZ3 241 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 FOXD3Q9UJU5 478 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 PCNX1Q96RV3 2341 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM189A5PLL7 270 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 ERVH48-1M5A8F1 160 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 KBTBD11O94819 623 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 KIR2DL2P43627 348 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-202ENST00000357250 DLX1P56177 255 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 SLC25A53Q5H9E4 307 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 TREM2Q9NZC2 230 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 IFITM10A6NMD0 228 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 LMX1BO60663 402 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 VENTXO95231 258 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 TGIF1Q15583 401 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 ABLIM2Q6H8Q1 611 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 Q6ZT83 130 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 OR5P3Q8WZ94 311 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 TNFRSF19Q9NS68 423 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 FBLN5Q9UBX5 448 aa10.06□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.05□□□□□ -0.8
COL9A1-202ENST00000357250 SRXN1Q9BYN0 137 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 ELOVL5Q9NYP7 299 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 SYNGR3O43761 229 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 ADRA2AP08913 450 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 MFAP4P55083 255 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 IFITM2Q01629 132 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 ARTNQ5T4W7 220 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 PPP1R32Q7Z5V6 425 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 QTRT1Q9BXR0 403 aaKnown RBP10.05□□□□□ -0.8
COL9A1-202ENST00000357250 TCF19Q9Y242 345 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 PSG9Q00887 426 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 COL5A1-AS1Q5SY13 56 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 TPRX1Q8N7U7 411 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 OR11H4Q8NGC9 324 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
COL9A1-202ENST00000357250 PCNTO95613 3336 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 METTL26Q96S19 204 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 LPAR2Q9HBW0 351 aa10.05□□□□□ -0.8
COL9A1-202ENST00000357250 THY1P04216 161 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 ACAA1P09110 424 aaPredicted RBP10.04□□□□□ -0.8
COL9A1-202ENST00000357250 TMPRSS3P57727 454 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 PRNTQ86SH4 94 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 PRR7Q8TB68 274 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 TBX15Q96SF7 602 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 MESP1Q9BRJ9 268 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 CEP350Q5VT06 3117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms