RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 EDA2RQ9HAV5 297 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 RNF115Q9Y4L5 304 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 H3BQ15 152 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 NKX2-2O95096 273 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 APOMO95445 188 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 CELA2AP08217 269 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 LOC285556D6RIA3 1793 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 PLXNB1O43157 2135 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 P2RY1P47900 373 aa14.94□□□□□ -0.02
COL27A1-201ENST00000356083 EWSR1Q01844 656 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL27A1-201ENST00000356083 KIAA1644Q3SXP7 199 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 FAM74A3Q4VXF1 159 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 CALYQ9NYX4 217 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 PAPPA2Q9BXP8 1791 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 HOXA3O43365 443 aaPredicted RBP14.93□□□□□ -0.02
COL27A1-201ENST00000356083 NDUFA3O95167 84 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 IGSF11Q5DX21 431 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 C17orf47Q8NEP4 570 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 COLQQ9Y215 455 aaPredicted RBP14.93□□□□□ -0.02
COL27A1-201ENST00000356083 DENND4AQ7Z401 1863 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 ABHD12Q8N2K0 398 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 TUBD1Q9UJT1 453 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 NRAPQ86VF7 1730 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 LEPROTL1O95214 131 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 LHX8Q68G74 356 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 Q6ZNB5 142 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 WFDC12Q8WWY7 111 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 SLC17A5Q9NRA2 495 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 SFTA2Q6UW10 78 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 SMIM18P0DKX4 95 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 ERASQ7Z444 233 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 MRGPRGQ86SM5 289 aa14.93□□□□□ -0.02
COL27A1-201ENST00000356083 SPSB4Q96A44 273 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 MIOXQ9UGB7 285 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 A0A1W2PQM1 296 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 RCC1P18754 421 aaPredicted RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 TNFSF10P50591 281 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 FAM209BQ5JX69 171 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 TYMSP04818 313 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 LBHQ53QV2 105 aaPredicted RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 GOLT1AQ6ZVE7 132 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 KIR3DL3Q8N743 410 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 OR9G4Q8NGQ1 327 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 MRPL24Q96A35 216 aaKnown RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 A0A0U1RRA0 63 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 RBMY1BA6NDE4 496 aaKnown RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 RBMY1EA6NEQ0 496 aaKnown RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 LIPT2A6NK58 231 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 RBMY1DP0C7P1 496 aaKnown RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 RBMY1A1P0DJD3 496 aaKnown RBP14.92□□□□□ -0.02
COL27A1-201ENST00000356083 RBMY1CP0DJD4 496 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 DSCAML1Q8TD84 2053 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 ARRDC5A6NEK1 342 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 IGHV4-39P01824 125 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 LIFP15018 202 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 MC5RP33032 325 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 EML6Q6ZMW3 1958 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 SLC6A13Q9NSD5 602 aa14.92□□□□□ -0.02
COL27A1-201ENST00000356083 FAM169BQ8N8A8 192 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 OR4C45A6NMZ5 311 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 CTGFP29279 349 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 ST6GALNAC3Q8NDV1 305 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 IGF2P01344 180 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 FAM3BP58499 235 aaPredicted RBP14.91□□□□□ -0.02
COL27A1-201ENST00000356083 PNKDQ8N490 385 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 TRGC1P0CF51 173 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 ABLIM2Q6H8Q1 611 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 PAPPAQ13219 1627 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 ARL14EPLP0DKL9 152 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 CBLN2Q8IUK8 224 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 LSM6P62312 80 aaKnown RBP14.91□□□□□ -0.02
COL27A1-201ENST00000356083 TBX21Q9UL17 535 aa14.91□□□□□ -0.02
COL27A1-201ENST00000356083 EFNB1P98172 346 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 EXOGQ9Y2C4 368 aaKnown RBP14.9□□□□□ -0.02
COL27A1-201ENST00000356083 A0A1B0GTL3 188 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 C1QTNF9BB2RNN3 333 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 IGLV3-27P01718 113 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 ABCA3Q99758 1704 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 J3QT63 122 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 CRYGNQ8WXF5 182 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 M0QZK8 103 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 GGCTO75223 188 aaKnown RBP14.9□□□□□ -0.02
COL27A1-201ENST00000356083 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 GBF1Q92538 1859 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 PSG9Q00887 426 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 TCF24Q7RTU0 167 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 FAM168AQ92567 244 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 SCTP09683 121 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 MESTQ5EB52 335 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 DEGS2Q6QHC5 323 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 ZNF385AQ96PM9 386 aaKnown RBP14.9□□□□□ -0.02
COL27A1-201ENST00000356083 PARLQ9H300 379 aa14.9□□□□□ -0.02
COL27A1-201ENST00000356083 MUC1P15941 1255 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-201ENST00000356083 C17orf51A8MQB3 221 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 CRYBB2P43320 205 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 ABHD1Q96SE0 405 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 NCKAP5O14513 1909 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 FAM74A7A6NL05 159 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 RSPO4Q2I0M5 234 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms