RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 ZNF705FA8MVS1 300 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 TMPRSS2O15393 492 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 ZNF705DP0CH99 300 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 ZNF705BP0CI00 300 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 WT1P19544 449 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM3BP58499 235 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 GABRA6Q16445 453 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 MOB1BQ7L9L4 216 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 QTRT1Q9BXR0 403 aaKnown RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 ACTR3CQ9C0K3 210 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 TIMM8BQ9Y5J9 83 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 CHD8Q9HCK8 2581 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 PGPEP1LA6NFU8 196 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 MLNRO43193 412 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 GPX4P36969 197 aaPredicted RBP10.21□□□□□ -0.77
SIRPA-201ENST00000356025 PAX9P55771 341 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 SSTP61278 116 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 ZNF66Q6ZN08 573 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 SAXO1Q8IYX7 474 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 ATG101Q9BSB4 218 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 PKIBQ9C010 78 aa10.21□□□□□ -0.77
SIRPA-201ENST00000356025 IGHV2-70P01814 119 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 TDGF1P13385 188 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 HOXA5P20719 270 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 INO80CQ6PI98 192 aaPredicted RBP10.21□□□□□ -0.78
SIRPA-201ENST00000356025 OR51G1Q8NGK1 321 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 PLEKHA3Q9HB20 300 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 TNRC18O15417 2968 aaPredicted RBP10.21□□□□□ -0.78
SIRPA-201ENST00000356025 SPTBN4Q9H254 2564 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 MARCH11A6NNE9 402 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 CLDN34H7C241 214 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 GYPAP02724 150 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 Q6P435 159 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 Q6ZT83 130 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 ZNF525Q8N782 197 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 FAM122AQ96E09 287 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 WIPI2Q9Y4P8 454 aa10.21□□□□□ -0.78
SIRPA-201ENST00000356025 SEC14L6B5MCN3 397 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 PPP5D1E7EU14 171 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 FOLR2P14207 255 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 MYOD1P15172 320 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 ELOBQ15370 118 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 ZNF585BQ52M93 769 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 MDS2Q8NDY4 140 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 ZNRD1Q9P1U0 126 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 DMRT1Q9Y5R6 373 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 CHD3Q12873 2000 aaKnown RBP10.2□□□□□ -0.78
SIRPA-201ENST00000356025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.2□□□□□ -0.784e-8■■■■■ 36.7
SIRPA-201ENST00000356025 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 UNQ6494/PRO21346Q6UXR6 183 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 ZNF497Q6ZNH5 498 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 CISD2Q8N5K1 135 aaKnown RBP10.2□□□□□ -0.78
SIRPA-201ENST00000356025 CLDND2Q8NHS1 167 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 ZNF729A6NN14 1252 aaPredicted RBP10.2□□□□□ -0.78
SIRPA-201ENST00000356025 THBS3P49746 956 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
SIRPA-201ENST00000356025 MIC13Q5XKP0 118 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 ACY3Q96HD9 319 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 MRPS18CQ9Y3D5 142 aaKnown RBP10.2□□□□□ -0.78
SIRPA-201ENST00000356025 MALRD1Q5VYJ5 2156 aa10.2□□□□□ -0.78
SIRPA-201ENST00000356025 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 KIR2DL2P43627 348 aaPredicted RBP10.19□□□□□ -0.78
SIRPA-201ENST00000356025 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
SIRPA-201ENST00000356025 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 ACP7Q6ZNF0 438 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 ZNF645Q8N7E2 425 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 DECR2Q9NUI1 292 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 IGHV3-21A0A0B4J1V1 117 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 C17orf112F2Z3M2 114 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 IGHV2-5P01817 119 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 TNFAIP6P98066 277 aaPredicted RBP10.19□□□□□ -0.78
SIRPA-201ENST00000356025 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 C16orf82Q7Z2V1 217 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 DYNLRB1Q9NP97 96 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 EXPH5Q8NEV8 1989 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 ZNF320A2RRD8 509 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 LINC00473A8K010 186 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 C11orf94C9JXX5 98 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 FAM78BQ5VT40 261 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 TMEM147Q9BVK8 224 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 WDR61Q9GZS3 305 aaKnown RBP10.19□□□□□ -0.78
SIRPA-201ENST00000356025 VAX2Q9UIW0 290 aa10.19□□□□□ -0.78
SIRPA-201ENST00000356025 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
SIRPA-201ENST00000356025 OR7C2O60412 319 aa10.18□□□□□ -0.78
SIRPA-201ENST00000356025 KITLGP21583 273 aa10.18□□□□□ -0.78
SIRPA-201ENST00000356025 DDTP30046 118 aa10.18□□□□□ -0.78
SIRPA-201ENST00000356025 SLC35B1P78383 322 aa10.18□□□□□ -0.78
SIRPA-201ENST00000356025 TMEM41BQ5BJD5 291 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms