RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 OR5AC2Q9NZP5 309 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 POLR3KQ9Y2Y1 108 aaPredicted RBP11.08□□□□□ -0.64
HOXA1-202ENST00000355633 AMMECR1Q9Y4X0 333 aaPredicted RBP11.08□□□□□ -0.64
HOXA1-202ENST00000355633 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 BUB1B-PAK6H3BSN5 160 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 L7N2F9 121 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 RLN2P04090 185 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 LYL1P12980 280 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 CXCL2P19875 107 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 NKX2-1P43699 371 aaPredicted RBP11.08□□□□□ -0.64
HOXA1-202ENST00000355633 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 RTL8BQ17RB0 113 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 VMO1Q7Z5L0 202 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 OR11H6Q8NGC7 330 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 OR1S1Q8NH92 325 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 R3HDM4Q96D70 268 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 MFFQ9GZY8 342 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 UNKLQ9H9P5 680 aaKnown RBP11.08□□□□□ -0.64
HOXA1-202ENST00000355633 LPAR2Q9HBW0 351 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 CACNG5Q9UF02 275 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 TNFSF18Q9UNG2 199 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 SPG11Q96JI7 2443 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 K7EPK0 472 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 ST8SIA3O43173 380 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 PITX3O75364 302 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 DEDDO75618 318 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 APOA2P02652 100 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 TAGLNQ01995 201 aaKnown RBP11.07□□□□□ -0.64
HOXA1-202ENST00000355633 KLRD1Q13241 179 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 Q6ZRM9 215 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 H2BFWTQ7Z2G1 175 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 LRRC75A-AS1Q8N1F1 130 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 FAM71E2Q8N5Q1 922 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 OR4P4Q8NGL7 312 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 NABP2Q9BQ15 211 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 SIRPDQ9H106 197 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 POMT1Q9Y6A1 747 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 TENM4Q6N022 2769 aa11.07□□□□□ -0.64
HOXA1-202ENST00000355633 FBN2P35556 2912 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 ARG1P05089 322 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 P0C879 139 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 NQO2P16083 231 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
HOXA1-202ENST00000355633 DVL1P1P54792 670 aaPredicted RBP11.06□□□□□ -0.64
HOXA1-202ENST00000355633 ERVK-16P61578 105 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 CXorf66Q5JRM2 361 aaPredicted RBP11.06□□□□□ -0.64
HOXA1-202ENST00000355633 DHRS7BQ6IAN0 325 aaPredicted RBP11.06□□□□□ -0.64
HOXA1-202ENST00000355633 DMBX1Q8NFW5 382 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 PCGF1Q9BSM1 259 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 H0YJW9 148 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 TOX4O94842 621 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 NXPH3O95157 252 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 RRASP10301 218 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 AP2S1P53680 142 aaPredicted RBP11.06□□□□□ -0.64
HOXA1-202ENST00000355633 HCP5Q6MZN7 132 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 SLC51BQ86UW2 128 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 INO80EQ8NBZ0 244 aaPredicted RBP11.06□□□□□ -0.64
HOXA1-202ENST00000355633 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
HOXA1-202ENST00000355633 RNF222A6NCQ9 220 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 H7C2Y5 167 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 MMP9P14780 707 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 HOXB4P17483 251 aaPredicted RBP11.05□□□□□ -0.64
HOXA1-202ENST00000355633 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
HOXA1-202ENST00000355633 ID3Q02535 119 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 SSX9Q7RTT3 188 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 RPEQ96AT9 228 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
HOXA1-202ENST00000355633 INSIG2Q9Y5U4 225 aa11.05□□□□□ -0.64
HOXA1-202ENST00000355633 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 TXNL1O43396 289 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 OR2F2O95006 317 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 HRASP01112 189 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 GAPDHP04406 335 aaKnown RBP11.04□□□□□ -0.64
HOXA1-202ENST00000355633 C4BPBP20851 252 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 HTR1DP28221 377 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 OR2F1Q13607 317 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 MIDNQ504T8 468 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 ACOT7LQ6ZUV0 252 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 MBD6Q96DN6 1003 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 MAGT1Q9H0U3 335 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 E5RGE8 158 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 RNASEK-C17orf49H0YIS7 233 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 LY6LH3BQJ8 138 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 WRBO00258 174 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 KCNAB3O43448 404 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 TSC22D2O75157 780 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 IGKV1-16P04430 117 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 S100A11P31949 105 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 MC5RP33032 325 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 NUP62P37198 522 aaPredicted RBP11.04□□□□□ -0.64
HOXA1-202ENST00000355633 IFITM2Q01629 132 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 ZNF345Q14585 488 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 PDPNQ86YL7 162 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
HOXA1-202ENST00000355633 TBX15Q96SF7 602 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 AIFM2Q9BRQ8 373 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms