RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PGLYRP1O75594 196 aaPredicted RBP4.53□□□□□ -1.68
CD47-201ENST00000355354 IGHEP01854 428 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 TLX1P31314 330 aaPredicted RBP4.53□□□□□ -1.68
CD47-201ENST00000355354 VWC2Q2TAL6 325 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 CLDND2Q8NHS1 167 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 RAB40AQ8WXH6 277 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 CACNG5Q9UF02 275 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 IGKV1D-17A0A075B6S4 117 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 TRAPPC6AO75865 159 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 TAS2R19P59542 299 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 RPL19P84098 196 aaKnown RBP4.53□□□□□ -1.68
CD47-201ENST00000355354 SLC38A11Q08AI6 406 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 UEVLDQ8IX04 471 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 GCSAMQ8N6F7 178 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 PLK3Q9H4B4 646 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 PLEKHJ1Q9NW61 149 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 POMT1Q9Y6A1 747 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 V9GYS6 101 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 UMAD1C9J7I0 102 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SRPX2O60687 465 aaPredicted RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 HSD11B1P28845 292 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 RPS10P46783 165 aaKnown RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 IDH3GP51553 393 aaPredicted RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 FAM27E3Q08E93 113 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 PEA15Q15121 130 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 OR10G8Q8NGN5 311 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 NRGNQ92686 78 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 DNTTIP1Q9H147 329 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 FCN1O00602 326 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 IFNA7P01567 189 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 GRPP07492 148 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 PPOXP50336 477 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 VAX1Q5SQQ9 334 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 LYPD2Q6UXB3 125 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 LCNL1Q6ZST4 164 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 OR52E5Q8NH55 327 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 GPER1Q99527 375 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 METTL8Q9H825 291 aaKnown RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 GGTLC3B5MD39 225 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 EIF4EBP3O60516 100 aaPredicted RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 PMS2P2O95744 297 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 CGAP01215 116 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 PYYP10082 97 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 ACTA2P62736 377 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 ACTG2P63267 376 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SLAQ13239 276 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SPANXN5Q5MJ07 72 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 PATE2Q6UY27 113 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SELENOHQ8IZQ5 122 aaKnown RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 OR1B1Q8NGR6 318 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 MRGPRDQ8TDS7 321 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 PHYHIPQ92561 330 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 POLR3KQ9Y2Y1 108 aaPredicted RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 ZNF878C9JN71 531 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SERPINA7P05543 415 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 UBCP0CG48 685 aaKnown RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 SLC25A4P12235 298 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SMIM11AP58511 58 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 ZNF90Q03938 601 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 RPS19BP1Q86WX3 136 aaKnown RBP4.52□□□□□ -1.69
CD47-201ENST00000355354 FAM216BQ8N7L0 139 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 C9orf106Q8NAJ2 232 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 OCC1Q8TAD7 63 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 UPB1Q9UBR1 384 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SH3BGRL2Q9UJC5 107 aa4.52□□□□□ -1.69
CD47-201ENST00000355354 SCO2A0A1W2PP80 73 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 CYTIPO60759 359 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 FAM180AQ6UWF9 173 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 INPP5EQ9NRR6 644 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 ZNF732B4DXR9 585 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 M0R3E3 92 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 DHRS3O75911 302 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 IL3RAP26951 378 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 KIR2DL2P43627 348 aaPredicted RBP4.51□□□□□ -1.69
CD47-201ENST00000355354 CARD18P57730 90 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 RAB1AP62820 205 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 TBC1D28Q2M2D7 210 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 MCEMP1Q8IX19 187 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 OR2C3Q8N628 320 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 PCBD2Q9H0N5 130 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 EDARQ9UNE0 448 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 NPIPA2E9PIF3 369 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 NPIPA3F8WFD2 350 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 XKRYO14609 159 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 OR6A2O95222 327 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 IGHV1-2P23083 117 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 GALR1P47211 349 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 ARL4DP49703 201 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 POLR2HP52434 150 aaKnown RBP4.51□□□□□ -1.69
CD47-201ENST00000355354 RPL23P62829 140 aaKnown RBP4.51□□□□□ -1.69
CD47-201ENST00000355354 C3orf36Q3SXR2 165 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 ABCA11PQ4W5N1 156 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 MDP1Q86V88 176 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 DYNAPQ8N1N2 210 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 SDSLQ96GA7 329 aa4.51□□□□□ -1.69
CD47-201ENST00000355354 FAM103A1Q9BTL3 118 aaKnown RBP4.51□□□□□ -1.69
CD47-201ENST00000355354 CLEC4MQ9H2X3 399 aaPredicted RBP4.51□□□□□ -1.69
CD47-201ENST00000355354 TMEM38BQ9NVV0 291 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms